Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0204 ATGCCTCTCACGCCCCCTTTCTCCCTTTTCCTTGCAATCCTAATCCTCTGTGGTCACGCCCATGGCCGTTTCGTGACCCACCTTCCATCATCGAATCTGATCTCCGATGGGGTCCATGATGATTCACGGTGGGACCCAAAGCAGAGCAACCCCATCCTGCTCCCCGGGGCTTCGTTGGGGTTTCTGGCGGAGTCTACCTGCGAGCAGACGTACGGGTTCTTACCCTGCACCACCACTGTTGTTGGGAATTTGTTCTTGATTTTGGTCTATGGATTCCTCATGTACAAGGCGGCTACCTACTTGTCCAGTGGGAGTGAGCTCTTGCTTGAGATCTTAGGCCCTGGTATTGTTGGTGGCTTGTTTCTTCCCATGCTCGGTGCTCTTCCAGATGCCATGCTTATTCTTGTATCCGGGCTTTCTGGTAGTAAAGAAACTGCTCAAAGTCAGGTCTATGTTGGAATGGGCTTGCTAGCTGGGTCGACAGTTCTGCTTCTGACTATAATATGGGGAACCTGCGTAATTGTTGGCAAGTGCGATATTGAGGGCTCAATTGCAATAGATTCTCAGGATACAAGGGGGTTTAGCTTAACTGGTTCTGGTGTCAGTACAGATATTTGGACAAGTTATGCTGCAATGATTATGGGCATATCTATCCTTCCATTTCTGATTGTTCAGTTACCACAAATTCTTAATTCAACTTCAGGAAGGCACTTGGCTGTTCTGATTGCGCTTATTGTCTCTGTGTGTTTGTTGATTACTTATTGCCTTTACCAGATTTTCCAGCCTTGGATACAGAGGAGAAAACTTGCTTATGTGAAACACAAGCATGTTATTTTAGGCCTTTTAAAACACTTAAGGCAGCGTGCATTAGGAAGGTTGCTGAGAGATGATGGTGAACCCGATGAAGATATTATAAAAAAGTTGTTTGCTACAATTGATGAGAACAATGATAGACACCTTTCTCATGGTGAACTGAGAGCACTAATTGTTGGAATTGAATTCGAGGAGATTGACCTGGATCACGATGATGCTGTGAATAGAATAATGCAAGATTTCGATACTTCACGTGATTCACGGGTTGATGTAAATGAATTTGTAGCTGGTATCTGTAGATGGCTTCAGAGGGCTAGGCGGTCTCAGGCTGCTTCTGGTGATGCTGGTCCACACACAATGAAGTTTTTAAGTGATTTTCATCTAGAAACAAAAAGGGAACATGATCTATTGGATGTGGGGGGTCATAGCGATGAAGCTGCCGAAGGTGCTGCTGATGCCAAAAGTAATATAATGAAAGCAGTGCTGCTACTGCTGCTTGGAACTGCTATTGCAGCTGCATTTGCTGATCCTCTGGTTGATGCAGTTGATAACTTCTCTGATGCCACCAGCATTCCTGCTTTCTTCATTTCCTTCATTGCACTGCCTTTGGCAACAAATTCAAGTGAAGCAGTGTCTGCAATCATTTTTGCTAGTCGCGATAAGAGGCAAACTGCCTCATTAACTTTTTCTGAGCTGTATGGGGGAGTGACAATGAACAATGTGCTGTGCCTGTCAGTGTTCTTGGCCTTAGTTTATGTGAGAGGATTGACTTGGGACTTCTCTTCAGAAGTGTTGGTTATTCTCTTAGTCTGCATAGTCATGGGTCTGTTCGGCAGCTTCCGCACCACTTTCCCTCTCTGGACAGCTATAATGGCTATCCTGCTTTACCCCTTATCCCTGGCTTTGGTCTATGTTCTTGATTTTGTGTTTGGCTGGTCATAG 1755 0.4519 MPLTPPFSLFLAILILCGHAHGRFVTHLPSSNLISDGVHDDSRWDPKQSNPILLPGASLGFLAESTCEQTYGFLPCTTTVVGNLFLILVYGFLMYKAATYLSSGSELLLEILGPGIVGGLFLPMLGALPDAMLILVSGLSGSKETAQSQVYVGMGLLAGSTVLLLTIIWGTCVIVGKCDIEGSIAIDSQDTRGFSLTGSGVSTDIWTSYAAMIMGISILPFLIVQLPQILNSTSGRHLAVLIALIVSVCLLITYCLYQIFQPWIQRRKLAYVKHKHVILGLLKHLRQRALGRLLRDDGEPDEDIIKKLFATIDENNDRHLSHGELRALIVGIEFEEIDLDHDDAVNRIMQDFDTSRDSRVDVNEFVAGICRWLQRARRSQAASGDAGPHTMKFLSDFHLETKREHDLLDVGGHSDEAAEGAADAKSNIMKAVLLLLLGTAIAAAFADPLVDAVDNFSDATSIPAFFISFIALPLATNSSEAVSAIIFASRDKRQTASLTFSELYGGVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILLVCIVMGLFGSFRTTFPLWTAIMAILLYPLSLALVYVLDFVFGWS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0204 584 Pfam EF-hand domain pair 305 367 IPR002048 GO:0005509
Sto7g0204 584 SMART efh_1 344 372 IPR002048 GO:0005509
Sto7g0204 584 SMART efh_1 304 332 IPR002048 GO:0005509
Sto7g0204 584 ProSitePatterns EF-hand calcium-binding domain. 313 325 IPR018247 -
Sto7g0204 584 PANTHER - 9 582 - -
Sto7g0204 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 9 582 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto7g0204 584 Gene3D - 420 577 IPR044880 -
Sto7g0204 584 ProSiteProfiles EF-hand calcium-binding domain profile. 340 375 IPR002048 GO:0005509
Sto7g0204 584 SUPERFAMILY EF-hand 299 373 IPR011992 -
Sto7g0204 584 Pfam Sodium/calcium exchanger protein 85 261 IPR004837 GO:0016021|GO:0055085
Sto7g0204 584 Pfam Sodium/calcium exchanger protein 431 575 IPR004837 GO:0016021|GO:0055085
Sto7g0204 584 CDD EFh 305 369 IPR002048 GO:0005509
Sto7g0204 584 ProSiteProfiles EF-hand calcium-binding domain profile. 300 335 IPR002048 GO:0005509
Sto7g0204 584 Gene3D - 258 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0204 Sto-Chr7 1484810 1489666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0204 20 584 EF-hand Containing Proteins AT1G53210 68.476 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0204 - - gmx:100809896 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0204 7 1484810 1489666 Sto7g0204 7 1484810 1489666 ECH