Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0179 ATGGCCAACAGTAATCTCCCTCGAAGAATCATCAAGGAAACGCAGCGTCTCCTCAGTGAGCCTGCACCAGGCATTAGCGCTTCACCTTCAGAAGACAATATGAGATATTTCAATGTGATGATCCTTGGCCCAACGCAGTCTCCTTATGAAGGGGGAGTTTTCAAGCTAGAACTATTTCTGCCAGAGGAATATCCAATGGCTGCTCCTAAGCTTGGCAGGATATGTCTTGATATTCTGAAAGATAAGTGGAGTCCTGCTCTTCAGATACGCACAGTTCTTTTGAGCATTCAAGCACTTCTGAGTGCACCCAACCCAGATGATCCACTTTCGGAGAACATTGCTAAGCATTGGAAATCAAATGAAGCCGAGGCTGTTGAAACAGCAAAGGAATGGACCCGGTTGTATGCTAGTGGTGCCTGA 420 0.4643 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0179 139 Gene3D Ubiquitin Conjugating Enzyme 1 70 IPR016135 -
Sto7g0179 139 PANTHER BNAA07G38410D PROTEIN 2 136 - -
Sto7g0179 139 Pfam Ubiquitin-conjugating enzyme 9 131 IPR000608 -
Sto7g0179 139 SUPERFAMILY UBC-like 7 137 IPR016135 -
Sto7g0179 139 CDD UBCc 7 132 IPR000608 -
Sto7g0179 139 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 136 - -
Sto7g0179 139 Gene3D Ubiquitin Conjugating Enzyme 71 139 IPR016135 -
Sto7g0179 139 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 137 IPR000608 -
Sto7g0179 139 SMART ubc_7 8 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0179 Sto-Chr7 1345959 1349418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0179 8 104 Miscellaneous Gene Families AT3G17000 28.319 2.70e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0179 K10580 - zju:107432499 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0179 7 1345959 1349418 Sto7g0179 7 1345959 1349418 ECH