Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0172 atgctAACTCTTCCCAGATTCGTCAATACTACCATTCGTCTTCTTGATTTCCCCCTCACACTCTCCACTTCCTTTCCGCCTCGTTTCTCCCACTATTCATTTCCTACTTCGAAACGTTTCTTTCGTTCCCGTTTCGAAAACCCTCCTCACATGGCTCCCCCTCCTTCTTCATCGTCGTCGACATCTAAGATCCTGGTGGAATATGCCAAGACGAATCGTTCTTCCTGCAAGATTTGCTCCGAAAACATTGACACTCATGCTCTGAGGTTGGGTGTGGTGTTTCGACACAACCGAGGGTTCGCCGTAACTAAATGGCATCACCTTCGTTGCTTCCCTCTTGACTCCAAGATAGATGTTTCGCCCGAAGCCATTGAAGGGTTTTCCTCTTTGGagACTAGTGATAAGGAGGCTATCATGAAGCATTTAGCTGGAGATGACAAGTCTCAAGAGGAGGTCCATGAAGCAACCGAAGATGTAGAAAATGAACTACAAGAAAGTGATTCAAAGAAGAGAAAGGTTCATGAAGCAACCGTAGAAAATGAACTGCAAGAAAGTGTCTCAAAGAAGAGAGAGGTGGATATCAACTTTTCAGCTTCTTATGTCAAGAGCAAGTACAAGGATGCTACCCTTTTACCAAAATGGAAGGCATTTGAGACTGTCATATTCCTTGGACGGGATGATGGTCTTCATGATTCAAGTAAGATTGCTGcatttgattttgatggatgTCTTGCAAAAACTGATGTGAAGAGAGTGGGTGCCGATGCTTGGTCCCTCATGTTTTCTTCAATTCCTGATAAATTACAAAGCTTATACAATGATGGGTTCAAGCTGGTCATTTTTACAAATGAATCCAACATCGAACGCTGGAAGAATAAGAGACAGGTAGCTGTGGACTCAAAAGTTGGACGTCTAAATAGTTTTATCAAGAAAGTGAAGGTCCCAATTCAGGTTTTTATTGCTTGTGGGCTAGGTAAATCAGGTAAAGCTGGCAGTAAAGAAGATGATCTGTTTCGCAAACCCAAACCAGGGGTGTGGCAACTTATGGAGAAACACTTCAACTCTGGCATTCCCATTGATATGGATCAATCCTTTTATGTTGGTGATGCAGCTGGGAGAGAACAGGATCACAGTGATGCTGATATTAAATTTGCAGAGGCCATTGGCTTAAAATTTTATGTCCCCGAAGATTACTTTGACGCATAG 1206 0.4212 MLTLPRFVNTTIRLLDFPLTLSTSFPPRFSHYSFPTSKRFFRSRFENPPHMAPPPSSSSSTSKILVEYAKTNRSSCKICSENIDTHALRLGVVFRHNRGFAVTKWHHLRCFPLDSKIDVSPEAIEGFSSLETSDKEAIMKHLAGDDKSQEEVHEATEDVENELQESDSKKRKVHEATVENELQESVSKKREVDINFSASYVKSKYKDATLLPKWKAFETVIFLGRDDGLHDSSKIAAFDFDGCLAKTDVKRVGADAWSLMFSSIPDKLQSLYNDGFKLVIFTNESNIERWKNKRQVAVDSKVGRLNSFIKKVKVPIQVFIACGLGKSGKAGSKEDDLFRKPKPGVWQLMEKHFNSGIPIDMDQSFYVGDAAGREQDHSDADIKFAEAIGLKFYVPEDYFDA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0172 401 MobiDBLite consensus disorder prediction 162 184 - -
Sto7g0172 401 SMART zf_PARP_3 67 143 IPR001510 GO:0003677|GO:0008270
Sto7g0172 401 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 64 162 - -
Sto7g0172 401 Gene3D - 212 401 IPR023214 -
Sto7g0172 401 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 67 141 IPR001510 GO:0003677|GO:0008270
Sto7g0172 401 MobiDBLite consensus disorder prediction 143 184 - -
Sto7g0172 401 Gene3D - 56 157 IPR036957 GO:0003677|GO:0008270
Sto7g0172 401 TIGRFAM DNA-3'-Pase: DNA 3'-phosphatase 225 399 IPR006551 -
Sto7g0172 401 Coils Coil 152 172 - -
Sto7g0172 401 Pfam Polynucleotide kinase 3 phosphatase 234 399 IPR013954 -
Sto7g0172 401 PANTHER BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE 57 399 - -
Sto7g0172 401 TIGRFAM HAD-SF-IIIA: HAD hydrolase, family IIIA 234 392 IPR006549 -
Sto7g0172 401 CDD HAD_PNP 234 399 - -
Sto7g0172 401 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 64 146 IPR001510 GO:0003677|GO:0008270
Sto7g0172 401 SUPERFAMILY HAD-like 224 399 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0172 K08073 - gmx:100796730 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0172 7 1289495 1294301 Sto7g0172 7 1289495 1294301 ECH