Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0105 ATGATGTCAGTAACAAGCCGAAGCCTTGATTTCACTGCGAAAAATTGGGTTGCTTCTTGTGGCTGCTCTTCCAATGCTTCGTTTGAGCGGTATTCTGTGAGAAATTACGCGAAGCTGAGTTCTAGAGGATGGAGCAGAGGCTATGGAGCTCGTAAATCAGTTTGTTGTAAGCGAGGTAGCACTCAATGTCGAGTTTCTTCGATGAAGACGGCGGAGCCTACGGTAAATGGTAGGTTGAACTCTAAAGGCCTTTTTTCAACAGGATTGGACTTGAAGAATTACTCAGAAACCCCTATTTCACCTGCAAAATTGTTTGAAGTGGTTGCGGATGACCTGATAACTCTCAACAAAAACCTCAAGTCGATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATCTTTAGTGCCGGTGGGAAGAGGATGAGACCAGCTTTGGTGTTCTTGGTTTCAAGAGCCACAGCTGAGCTAGTTGGGTTGAAGGAACTTACTTTAAAGCATCGGCGTTTAGCAGAGATAATTGAAATGATTCATACAGCAAGTTTGATACATGATGATGTATTAGATGAGAGCAACCTGCGCAGAGgtaaggaAACTGTCCATCAACTGTTTGGAACAAGAGTGGCTGTGCTTGCGGGCGACTTCATGTTTGCACAGTCATCGTGGTATCTTGCCAACCTCGAAAACCTTGACGTTATTAAACTTATCAGTCAAGTGATTAAAGATTTTGCAAGTGGTGAAATAAAGCAGGCTTCTAGCTTGTTTGATTGCGATGTTCAGCTTGAGGAGTATCTAACCAAGAGTTACTACAAAACAGCCTCCTTGATTGCTGCCAGCACAAAGGGAGCTGCTATTTTCAGTGGCGCCGACAACAGCATCATTGAGAAAATGTACGAATACGGAAGAAATCTCGGTCTGTCCTTCCAAGTTGTGGATGACATACTGGATTTCACACAAACTGCAGAGCAACTGGGAAAGCCTGCTGCTAGTGACCTTGCCAAAGGTAACCTGACTGCACCTGTAATTTTCGCATTGGAGAAAGAACAAAAACTAAGGGACATCATTGAGTCTGAATTCAGTGAAACTGGATCCTTCGACGAAGCCATTGCATTGGTTAAGGGTTCTGGGGGAATCGAAAGAGCGCAAGAGCTAGCTAAAGAGAAAGCTGATCTTGCCCTTCAAAATCTCCAGTGCCTTCCTCCAAGCGTGTTTCGATTAGCTCTTGAAGATATGGTGGCATATAATCTTCAAAGAATTGCATAA 1272 0.4379 MMSVTSRSLDFTAKNWVASCGCSSNASFERYSVRNYAKLSSRGWSRGYGARKSVCCKRGSTQCRVSSMKTAEPTVNGRLNSKGLFSTGLDLKNYSETPISPAKLFEVVADDLITLNKNLKSIVGAENPVLMSAAEQIFSAGGKRMRPALVFLVSRATAELVGLKELTLKHRRLAEIIEMIHTASLIHDDVLDESNLRRGKETVHQLFGTRVAVLAGDFMFAQSSWYLANLENLDVIKLISQVIKDFASGEIKQASSLFDCDVQLEEYLTKSYYKTASLIAASTKGAAIFSGADNSIIEKMYEYGRNLGLSFQVVDDILDFTQTAEQLGKPAASDLAKGNLTAPVIFALEKEQKLRDIIESEFSETGSFDEAIALVKGSGGIERAQELAKEKADLALQNLQCLPPSVFRLALEDMVAYNLQRIA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0105 423 SUPERFAMILY Terpenoid synthases 103 421 IPR008949 -
Sto7g0105 423 Pfam Polyprenyl synthetase 129 374 IPR000092 GO:0008299
Sto7g0105 423 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 2 422 - -
Sto7g0105 423 ProSitePatterns Polyprenyl synthases signature 1. 185 199 IPR033749 -
Sto7g0105 423 ProSitePatterns Polyprenyl synthases signature 2. 307 319 IPR033749 -
Sto7g0105 423 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2 422 - -
Sto7g0105 423 SFLD Isoprenoid Synthase Type I 133 416 - -
Sto7g0105 423 Gene3D Farnesyl Diphosphate Synthase 100 422 IPR008949 -
Sto7g0105 423 CDD Trans_IPPS_HT 125 421 IPR000092 GO:0008299
Sto7g0105 423 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 100 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0105 Sto-Chr7 779177 782135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0105 K05356 - gmx:100783538 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0105 7 779177 782135 Sto7g0105 7 779177 782135 ECH