Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4404 ATGTCGACCGTTAGCTCAGAGGCAATCTTGCACATCTGTCGTAGAGAAATTCCAAGTCTTGGATCCAAATCCAAGACGGTTAGCTTCGTCAATTACTCTTCCAAGCATGTCGTCTCCAATATTAATGCCATTGCCAGGAGCCTCAGACCGCTCCATACGTCTTCATCTCTAACTGTTGCAGCTGCTTCAACCGATACTCATACACCTACCTTGGAGGCCTCTCAATCTGCTGATGTATCCGTCAATAAGACTTTTCCTATTAACCGAACTGAAATGGTGGAGGGAAAGATCTCCATAAGATTAGATCAAGGGAAGGATTCGAGCAACTGGGAGCTAAGGGTTGGCTGTAATCTTCCCGGAAAATGGATTCTTCACTGGGGTGTTTCCCGCGTTAATGATGTTGGAAGTGAATGGGATCAACCTCCCAGCCATATGATACCCCCGGGTTCTATTCCTGTAAAGAGCTACGCTGTAGAGACACCCTTGAAGAAACCACCATCATCATTGTCTGCCCAAGGAGATGCATTTTATGAAGTCAGAATTGATCTTAAACCCGGCAGCAACATTTCGGCAATTAATTTTGTTCTCAAGGATGAGAGGACCGGTGTTTGGTATCAAGACAAAGGAAGAGATTTCAAGGTGCCGTTGGCCAACTACCTCAAGGAGGATGCCAATATAATTGGACCTAAAAGAGGCTTTAATTTCTGGCCAgGGGCCTTGGGGCAGTTATTTAACATGCTCCTGAAATCGAAAGCAACGGGTAACAAAGATCAATCTAGTCAACTTGAAGGTTTCTGCGTAGAACTGCCAATTACTAAAGAAGTTTCGGTCAATCATTCTATCAGTGTCTCCATTAAAAAGTGCTCTGAGACAGGCAAGAACCTTTTATATTTGGAAACAGATCTACCAGGAGATCTTGTCCTTCACTGGGGAGTTTGCCGGAATGAAGCAAGAAGGTGGGAAGTTCCACCAGCTCCTCATCCTCCAGAAACTGTCATTTTTAAAGACAAGGCTTTGAGGACTCCGTTACAGCCAAGAGACAGTGGAACTGGAAAAGGATGCTCCATAAGCATCACTTTGGGAGAGGACTTTTCAGGATTCCTTTTTGTTGTTAAGCTAAATGGAACTAGTTGGTTAAAGTACATGGGAAATGACTTTTACGTTCCTATTCCTATCTCAAGTTCTAGTAATGAGTCACAAGGCGTGCATATAGAAGAGCCGAGTGAAACAGGCTTTTTTTCTGGATTTACTGATGGAATAATCAACGAAATAACGAATTTGGTGTCGGACAAGACAAAatcaaaagaagagagtgagagaCTTGATGCTGAAGTGGAGAAACAGAGCTTGCCTTCCAAAATATACTCAGGAACAGGAACAGGGTATGAGATATTATGCCAAGGCTTTAACTGGGAATCTCATAAATCTGGAAGATGGTACATGGAGTTGAAAGAGAAAGCTGCAGAACTTGCCTCACTTGGTTTTTCTGTGATATGGCTACCACCACCCACAGACTCTGTTTCACCTGAAGGCTACATGCCAAaggatttatataatttaaattccaGATACGGGAACATTGATGAACTGAAGGATTTAGTAAAAAGATTCCATCAAGTTGGGATCAAAGTTCTTGGAGATGCTGTTATAAATCACCGCTGCGCCCAATATCAGAATCAGAATGGCGTTTGGAACATATTTGGTGGTCGTCTCAACTGGGATGATCGTGCAGTCGTTGCTGATGATCCACATTTTCAGGTGAATCTGGAATACATAACggatatattttttatacagGGTAGAGGCAACAAGAGTAGTGGAGATAATTTCCATGCTGCTCCAAACATTGATCATTCGCAGGAGTTCGTTAGAAATGATCTGAAACAATGGTTATGCTGGATGAGGAAAGAAATTGGGTACGATGGATGGAGGCTTGACTTTGTTAGAGGGTTTTGGGGTGGTTATGTAAAGGACTATGTGGAGGCGAGTGAACCTTACCTTGCCGTAGGAGAATATTGGGATTCCCTGAGTTATACATACGGTGAAATGGATCACAATCAAGATGCACATAGGCAGAGAATAATTGACTGGATCAATGCTACCAATGGTTCTGCCGGTGCTTTTGATGTTACAACAAAAGGGATTCTTCACTCAGCATTAGAAAGATGTGAATATTGGCGTTTATCAGATCAGAAGGGAAAACCCCCTGGTGTTATTGGATGGTGGCCATCTCGTGCTGTTACCTTCATAGAAAATCATGACACCGGTTCTACCCAGGGTCATTGGAGATTTCCTAGTGGAAAAGAAATGCAAGGATATGCTTACATTCTTACTCACCCAGGAACACCATCAGTGTTCTATGACCACATTTTCTCTCACTATCAAACTGAAATACAAGCACTTATCTCTCTCAGGAAACGGAACAAGATTCACTGTAGGAGTACTGTTCAAATCGTTAAGGTGGAAAGGGACGTGTATGCAGCTATCATCGACGAAAAAATTGCTATGAAGATTGGACCTGGTCATTTTGAACCCCCAAGCGGATCCCAGAGATGGTCCTTAGCCGGCTATACTCTCTTGTTGAGACCTTGTCATCATCACTTGGTTGTAGCTGCCCTACAAAAAGCATACAAATCAAGATATGCTTTAGCATGCAGATACCAGTATATGTTACCAGATGATTTAACAAAAAACAAGCAACACTTGAGCAGTCAGAAGATGAGTTTATTATTGGAAATAAGGGGCCTAGCAAAACTGATACAAGCACTACCTAGATTTCCCAAAAGGCCAAAACACATGTACAAGCTTCAAAAGCAGGGAAAAGATTTAGAGCAACAAGATCAAACCTCAATAACGGCCTTCGCTGTTGATCTAGCTTTTCCGTACCATCTGAAGCTGACCAGTCTATCCCAGCAGACAGGGTATCTGCAATGTCTTTCAGACCCTGCAAGTCAAGACAGCATGACGTAG 2970 0.4209 MSTVSSEAILHICRREIPSLGSKSKTVSFVNYSSKHVVSNINAIARSLRPLHTSSSLTVAAASTDTHTPTLEASQSADVSVNKTFPINRTEMVEGKISIRLDQGKDSSNWELRVGCNLPGKWILHWGVSRVNDVGSEWDQPPSHMIPPGSIPVKSYAVETPLKKPPSSLSAQGDAFYEVRIDLKPGSNISAINFVLKDERTGVWYQDKGRDFKVPLANYLKEDANIIGPKRGFNFWPGALGQLFNMLLKSKATGNKDQSSQLEGFCVELPITKEVSVNHSISVSIKKCSETGKNLLYLETDLPGDLVLHWGVCRNEARRWEVPPAPHPPETVIFKDKALRTPLQPRDSGTGKGCSISITLGEDFSGFLFVVKLNGTSWLKYMGNDFYVPIPISSSSNESQGVHIEEPSETGFFSGFTDGIINEITNLVSDKTKSKEESERLDAEVEKQSLPSKIYSGTGTGYEILCQGFNWESHKSGRWYMELKEKAAELASLGFSVIWLPPPTDSVSPEGYMPKDLYNLNSRYGNIDELKDLVKRFHQVGIKVLGDAVINHRCAQYQNQNGVWNIFGGRLNWDDRAVVADDPHFQVNLEYITDIFFIQGRGNKSSGDNFHAAPNIDHSQEFVRNDLKQWLCWMRKEIGYDGWRLDFVRGFWGGYVKDYVEASEPYLAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINATNGSAGAFDVTTKGILHSALERCEYWRLSDQKGKPPGVIGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPSVFYDHIFSHYQTEIQALISLRKRNKIHCRSTVQIVKVERDVYAAIIDEKIAMKIGPGHFEPPSGSQRWSLAGYTLLLRPCHHHLVVAALQKAYKSRYALACRYQYMLPDDLTKNKQHLSSQKMSLLLEIRGLAKLIQALPRFPKRPKHMYKLQKQGKDLEQQDQTSITAFAVDLAFPYHLKLTSLSQQTGYLQCLSDPASQDSMT 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4404 989 CDD AmyAc_arch_bac_plant_AmyA 464 816 - -
Sto6g4404 989 Gene3D - 810 857 IPR013780 -
Sto6g4404 989 SUPERFAMILY Glycosyl hydrolase domain 810 855 - -
Sto6g4404 989 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 83 335 - -
Sto6g4404 989 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 437 855 - -
Sto6g4404 989 SMART aamy 463 805 IPR006047 GO:0005975
Sto6g4404 989 Pfam Alpha-amylase C-terminal beta-sheet domain 807 855 IPR012850 GO:0004556|GO:0005509|GO:0005975
Sto6g4404 989 SUPERFAMILY (Trans)glycosidases 462 793 IPR017853 -
Sto6g4404 989 Pfam Alpha amylase, catalytic domain 490 786 IPR006047 GO:0005975
Sto6g4404 989 PANTHER ALPHA-AMYLASE 83 335 - -
Sto6g4404 989 PANTHER ALPHA-AMYLASE 437 855 - -
Sto6g4404 989 SMART alpha-amyl_c2 806 862 IPR012850 GO:0004556|GO:0005509|GO:0005975
Sto6g4404 989 Gene3D Glycosidases 463 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4404 Sto-Chr6 46476819 46486484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4404 1 855 Glycoside Hydrolase AT1G69830 60.643 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4404 K01176 - gmx:100788193 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4404 6 46476819 46486484 Sto6g4404 6 46476819 46486484 ECH