Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4396 ATGAACAGAGGAACCCACATGGGGCGCCAAAAGCTGGGCACAAGCGCGAATCAAGAAATTGAAAGTGTAATTGTCAGGAGAGAGATTGTTTGTGGAGTGGAGAATTTGATTATAGAAGTGAAAACTTTTGTGAGGATTGCAAGTCTTGGAGTAAGCTCTGATCATGGAGTTGAAGAAGATGAAGGTGGAAGGAAACCGGGATGGAGGGCGATGCCTTACATCTTAGGAAATGAGACAATAGAAAGGATAGCGACGTACGGGATGGCAGCAAACTTCATGGTGTTTCTGTTGAAAGTGTTCAATTTGGGTCAGGTTGGTGCTGCCAACGTGATCAGCATATGGCATGGGTCCAGCAATTTCATACCAATCCTTGGTGCCTTCCTGGCTGATTCCTATTTGGGAAAATTTAGAACCATTGCTGGCGCATCCTTTGCGACGCTGgtgGGCATAGTGATCCTAACACTCACAGCTTGGGTGCCACGATTCCATCCTCCTCCATCCACTTCCCCAACCACCTTCCAGCTTTCCATATTAATGTTTGGCCTCTGCTGCATGGCCATTGGCACTGGTGGAATCAGACCCTGCAGCATTCCCTTTGCTGTTGATCAATTTGACACTAGTTGTGCCCAGGGAAGACAAGGAGTCGCCAGATTCTACAATTGGTACTATACCACCCAGACTCTCGTCTCCCTTATCAATATCACACTGGTGGTTTACATCCAAAACAGGAActgggtcttgggttttggcCTTCTAGCTCTTCTCATGTCTTGTGCTATCATTTTGTTTTTGGCTGGCACTAGAGTTTATTCTCACATTCCACCACAGGGTAGCTTGCTCTCTGCTATTGCTCAAGTCTTTGTTGCAGCTTACAGCAAGCGAAGACTGGAATGCCCACCAATTCCTCAACTTGAACAACAGGAACCACGCGTCATTATTTACTATGATCCTCCACTCAAGCAGAACACAAGAATCAAGATGCCATTAACCAAGCAACTAGAGTGGTTGAACAAAGGTGCAGTCGTGGTACAAGATAACGAGGTAAATGCAGAGGGGTTGGCTACAAACTCATGGAGGCTTTGCAGCATCCAGCAAGTGGAAGAAGTAAAGTGCTTGGTCAAGTTAATCCCCATCTGGGCATCTGGAATCTTGTCTACTATTCCCATGACTCAGCAAGGAACTTTTCCTGTGTCACAAGCCTTGAAAATGGACAGGCAGCTTGGCCACTTTCAAATGCCTGCTGCATCAATCGGTGTGGTAGCCCTACTCACCATAGCCATATGGCTTCCCTGCTATGACTTGTTTATACAACCAGCTCTTGCAAAACTCACCAAACGAGAACAAGGCCTCACAAGCCTTCACAAGATTGTGTTTGGCAACATCTTTGCAATTCTTACAATGCTTAGTGCCGGATTAgtagagggaagaagaagaacaagggcATTGCATATGCATGCACCCCCCATGTCAGTCTTCTGCCTCGCTCCTCAGTTCGCTCTATTGGGTTTGTCTGAAGTGTTCATCATTATTGGACAAATAGAGTTCTATAACAGTGAATCTCCAGAGCACATGAAGAGTATAGCAAACTCTCTTCAATATCTCGTAGCCGCTTTCTCCACTTACACAGGAGCCTTGCTCATGAACCTCGTCCATAAGTTCACAAACAAGCATGCCGCAACAGATTGGCTCAACGATGACATCAACAAAGGGAGACTGGATTACTACTACTTCCTCGTTGCAGGATTGGCATCTCTTAATCTTCTCTACCTCCTCTTTTGTGCTAAACGCTACCGTTACAAGGCCACTACCGCCAAGTCACAAGTTTTAGATACACCTACTACTacctaa 1848 0.4448 MNRGTHMGRQKLGTSANQEIESVIVRREIVCGVENLIIEVKTFVRIASLGVSSDHGVEEDEGGRKPGWRAMPYILGNETIERIATYGMAANFMVFLLKVFNLGQVGAANVISIWHGSSNFIPILGAFLADSYLGKFRTIAGASFATLVGIVILTLTAWVPRFHPPPSTSPTTFQLSILMFGLCCMAIGTGGIRPCSIPFAVDQFDTSCAQGRQGVARFYNWYYTTQTLVSLINITLVVYIQNRNWVLGFGLLALLMSCAIILFLAGTRVYSHIPPQGSLLSAIAQVFVAAYSKRRLECPPIPQLEQQEPRVIIYYDPPLKQNTRIKMPLTKQLEWLNKGAVVVQDNEVNAEGLATNSWRLCSIQQVEEVKCLVKLIPIWASGILSTIPMTQQGTFPVSQALKMDRQLGHFQMPAASIGVVALLTIAIWLPCYDLFIQPALAKLTKREQGLTSLHKIVFGNIFAILTMLSAGLVEGRRRTRALHMHAPPMSVFCLAPQFALLGLSEVFIIIGQIEFYNSESPEHMKSIANSLQYLVAAFSTYTGALLMNLVHKFTNKHAATDWLNDDINKGRLDYYYFLVAGLASLNLLYLLFCAKRYRYKATTAKSQVLDTPTTT 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4396 615 Pfam POT family 136 563 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto6g4396 615 PANTHER PEPTIDE/NITRATE TRANSPORTER 56 606 - -
Sto6g4396 615 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 56 606 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto6g4396 615 SUPERFAMILY MFS general substrate transporter 62 599 IPR036259 -
Sto6g4396 615 Gene3D MFS general substrate transporter like domains 47 606 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4396 Sto-Chr6 46419152 46425522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4396 40 600 Organic Solute Cotransporters AT1G69870 48.696 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4396 - - ccaj:109792442 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4396 6 46419152 46425522 Sto6g4396 6 46419152 46425522 ECH