Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4370 ATGAAGTGCTTGTCGCACCTCTCATCGTATACTGCTGCTATATTTACGAGGACCACTTACTTCCTTACCAATCCTTCTCTGCACGGATGTTCTACCTTCTCATGGAAGAGACAATTGGAGTATCCCGCTATTAGGTCTGTCCATTTAGATTTTGTGCTGACGAGGTTTCGTGTTCAGTGCTATTCATCAAGAAAAGGCCGCAAACCTGCTTCTAAATTGCAGAAACTAGATCCTGAACCAGTGATGGAGCAAGAGAAGAATGCTTTTTTTGTCGTGCGCAAAGGGGATATAGTTGGAATCTATAATACTCTCTCTGATTGTCAGGCTCAAGTTGGATCTTCTATATCCAATCCCCCTGTCAGTGTGTACAAGGGATACTCCTTGCCTAAAGACACTGAGGAATATCTTGTTGCCCGTGGGCTGAAGAATGCTTTGTACACTATTAGAGCTGCAGATTTGAAGGAGGATATGTTCGACACGCTTGTTCCTTGCCCCTTTCAGGATCCAGCTTCGTCCAGCACAGGAACATCAAACAAGGATGTGTCCAAAAAGAGATCTTTGGGAGTGCTTGGACAAGAGAATTTGGAGGATGGAACTGGTCTGACATCCCTCTCAGAAGATCCCATGAGAAAACAAGTGAAGTTAGAGCATACTTCTGTGCCTCAAGCACCTTCATCTGAACTTCGGACTTGTATACTTGAGTTCGATGGTGCATCAAAAGGAAATCCAGGGATAGCTGGAGCAGGGGCTATTCTGCGGGCTAGTGATGGCAGTTTGATTGACGGTTTATGGAAGGTCAAGAACCAGAACATGTCTGATTTGTATAAGGTGGCAAAAGAACTCAAGGATAAATTTTTATCATTCCAGATTACTCATGTTCTAAGGATGCTTCGGAGAGGGTTTCCCAACTTCAAGCTCACCGCCACCACCTTCCGTCGCTTGCTTTCTTCAATGTCTTCCCCACTCCCATTGCGttcttcttccatctctgcttctAGGGTCTCTGATTCCGACGATGATGAAAATCTGGACTCTTCTCTCTCTTCGGTAGTCCATCCCGTTGGCACCGTCCCCTCGTTGCTTCAACCGAGAGTCGTTGTTTATGATGGCGTCTGTCATCTCTGCCACCGAGGAGTGAAATGGGTAATCAAAGCAGACAAGAACAGGAAGATCAAGTTCTGTTGTGTTCAATCGAAGGCTGCTGAGCCGTATTTGAATGCATGTGGTCTTGAACAAGAGGATGTCCTCCATCGCTTTTTATTTGTTGAAGGCCTGAATTCATACAGTCAGGGATCTACTGCTGCATTGCGGGTAATGTCATACTTGCCGCTACCTTACTCTGCTTTAAGCTCACTGTTGGTGGTTCCAAGGCCAGTCAGAGATGCTGTCTACGATTATATAGCCAAGCATCGATATAAATGGTTCGGGAAGGCTGAAGATTGTTTAGTTTTGCAGGAGAAAGAGCTGCTTGACCGTTTTGTAGATTGGGAAGAATTGAATGGGAGATGA 1509 0.4473 MKCLSHLSSYTAAIFTRTTYFLTNPSLHGCSTFSWKRQLEYPAIRSVHLDFVLTRFRVQCYSSRKGRKPASKLQKLDPEPVMEQEKNAFFVVRKGDIVGIYNTLSDCQAQVGSSISNPPVSVYKGYSLPKDTEEYLVARGLKNALYTIRAADLKEDMFDTLVPCPFQDPASSSTGTSNKDVSKKRSLGVLGQENLEDGTGLTSLSEDPMRKQVKLEHTSVPQAPSSELRTCILEFDGASKGNPGIAGAGAILRASDGSLIDGLWKVKNQNMSDLYKVAKELKDKFLSFQITHVLRMLRRGFPNFKLTATTFRRLLSSMSSPLPLRSSSISASRVSDSDDDENLDSSLSSVVHPVGTVPSLLQPRVVVYDGVCHLCHRGVKWVIKADKNRKIKFCCVQSKAAEPYLNACGLEQEDVLHRFLFVEGLNSYSQGSTAALRVMSYLPLPYSALSSLLVVPRPVRDAVYDYIAKHRYKWFGKAEDCLVLQEKELLDRFVDWEELNGR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4370 502 SUPERFAMILY L9 N-domain-like 88 136 IPR009027 -
Sto6g4370 502 Pfam DCC1-like thiol-disulfide oxidoreductase 366 477 IPR007263 GO:0015035
Sto6g4370 502 MobiDBLite consensus disorder prediction 167 222 - -
Sto6g4370 502 Pfam Caulimovirus viroplasmin 89 127 IPR011320 -
Sto6g4370 502 Gene3D - 86 138 IPR037056 -
Sto6g4370 502 MobiDBLite consensus disorder prediction 320 347 - -
Sto6g4370 502 SUPERFAMILY Ribonuclease H-like 230 292 IPR012337 -
Sto6g4370 502 PANTHER THIOL-DISULFIDE OXIDOREDUCTASE DCC 311 500 - -
Sto6g4370 502 MobiDBLite consensus disorder prediction 167 183 - -
Sto6g4370 502 PANTHER THIOL-DISULFIDE OXIDOREDUCTASE DCC-RELATED 311 500 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4370 - - jcu:105649844 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4370 6 46246124 46254379 Sto6g4370 6 46246124 46254379 ECH