Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4363 ATGGGCTTCACTTCAActctttctctctactctcACCCTCAGGTGCTATTGCATAGCCAGAGGCGCCAATGCTTCGGACCATATCCGCAATTTGCATATCTTCCACTTCCAAGCCTTTACACTGCAAGAAAGCGTCGCAGGTGCAGGATTTTGGTGGTTAGGGCTGCTTCCAGTGTCCATGGAACTCCGAGTCGGTCTTCCGGTTCTCGCAGAGTTTATCGGCAGTCGCAGGCTGCAAGTCCTTTATCCAGTGCCCCGGTGAAGCAGATTGCCTCCTTTGTTGTGCCTGCTGGAGTCTTCGTAGCTGTCACTTTTGAAAAGCTTCTTGCTCCAAAGCAATCAAAGCCTTTAACTGTAGAAAGCCAATCTGCTTCACGAGGAATGAAATGGTCTATTGCCCCTGGTACAAATTTGTTGTCAAAACTCGGTGCAAAGATTGAGAGAGAATCCAAGCAGAAGCTCAATGAGTTTGCTCGAGAACTGAAGGCATTTCCAAGCATTGACATGTCAGGACGCAACTTTGGGGATGAAGGATTATTCTTTCTTGCTGAAAGTTTAGCATTTAACCAGATTGTGGAGGAAGTGAGTTTTGCTGCAAATGGAATAACTGCAGCTGGATTGAAAGCTTTTGATGGCGTTCTTCAATCAAATTTCACATTGAAGACTCTTGATCTTTCTGGAAATCCTGTTGGCGATGAAGGAGTTAAGTGCTTATGTGACATATTGGTGGGCAACTCCAGTATTGAGAAGCTCCAGCTGAATAGTACTGACTTGGGTGACGAGGGTGCGAAAGCTATTGCAGAAATGTTGAAGAAAAATTCTACTTTGAGGGTTCTTGAATTGAACAACAATATGATTGAATATTCTGGATTTACAAGTCTCGCTGGTGCACTTCTTGAGAATAACAGCATACGGAACATACATCTCAATGGCAATTATGGCGGTGCTTTGGGGGCTAATGCATTTGCTAAAGCACTTGAGAGCAACAAGTCTTTAAGGGAGCTTCATCTGCATGGAAATTCAATAGGAGATGAAGGAATCCGTGCCTTGATGTCAGGATTATCTTCACACAAAGGGAAACTGACACTTCTGGACATTGGCAACAACTCATTAAGTGCTAAAGGCGCATTTCATGTTGCTGAATATATTAGAAAGAGCAGGAGCTTGTTATGGTTGAACCTTTACATGAATGACATTGGTGATGAGGGAGCTGAAAAAATTGCAGATGCTTTAAAGGAAAATCGCTCCATAACAACATTAGACCTGGGAGGAAATAACATTCATGCTGCAGGAGTTAGTGCTGTTGCTCAAGTTTTAAAAGACAATTCAGTCATTACCACTTTAGAACTTAGTTATAATCCCATTGGTTCAGATGGAGCCAAGGCCTTGGCTGAAGTTCTCAAGTTTCATGGAAACGTAAAAACCCTTAAGCTTGGTTGGTGCCAGATAGGAGCAAAGGGAGCAGAGTTCATTGCGGATACCTTGAAATATAATACTACAATATCAGTTCTGGACTTGCGGGCAAATGGACTAAGAGATGAGGGTGCTGCCTGTTTGGCTCGGAGCTTGAAAGTAGTTAATGAAGCTTTAACCTCTATAGATTTAGGATTCAACGAAATACGGGATGATGGGGCTTTTGCTATTGCCCAAGCGCTCAAGTCTAATGATGATATAGCTGTCACATCTTTAAACATTGCCAGTAACTTCCTTACAAAATTTGGGCAGAGTGCGCTAGCTGATGCAAGAGACCATGTCTATGAGATGACTGAAAAGGAAATCAACATTTTTCTATAG 1794 0.4242 MGFTSTLSLYSHPQVLLHSQRRQCFGPYPQFAYLPLPSLYTARKRRRCRILVVRAASSVHGTPSRSSGSRRVYRQSQAASPLSSAPVKQIASFVVPAGVFVAVTFEKLLAPKQSKPLTVESQSASRGMKWSIAPGTNLLSKLGAKIERESKQKLNEFARELKAFPSIDMSGRNFGDEGLFFLAESLAFNQIVEEVSFAANGITAAGLKAFDGVLQSNFTLKTLDLSGNPVGDEGVKCLCDILVGNSSIEKLQLNSTDLGDEGAKAIAEMLKKNSTLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGANAFAKALESNKSLRELHLHGNSIGDEGIRALMSGLSSHKGKLTLLDIGNNSLSAKGAFHVAEYIRKSRSLLWLNLYMNDIGDEGAEKIADALKENRSITTLDLGGNNIHAAGVSAVAQVLKDNSVITTLELSYNPIGSDGAKALAEVLKFHGNVKTLKLGWCQIGAKGAEFIADTLKYNTTISVLDLRANGLRDEGAACLARSLKVVNEALTSIDLGFNEIRDDGAFAIAQALKSNDDIAVTSLNIASNFLTKFGQSALADARDHVYEMTEKEINIFL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4363 597 PANTHER NACHT, LRR AND CARD DOMAINS-CONTAINING 532 581 - -
Sto6g4363 597 PANTHER NACHT, LRR AND CARD DOMAINS-CONTAINING 145 527 - -
Sto6g4363 597 SUPERFAMILY RNI-like 158 355 - -
Sto6g4363 597 Pfam Leucine Rich repeat 245 267 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 442 464 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 414 436 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 472 492 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 328 351 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 216 239 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 386 408 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 497 520 IPR001611 GO:0005515
Sto6g4363 597 Pfam Leucine Rich repeat 530 549 IPR001611 GO:0005515
Sto6g4363 597 Gene3D Ribonuclease Inhibitor 467 595 IPR032675 -
Sto6g4363 597 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN 145 527 - -
Sto6g4363 597 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN 532 581 - -
Sto6g4363 597 SMART LRR_RI_2 498 525 - -
Sto6g4363 597 SMART LRR_RI_2 527 554 - -
Sto6g4363 597 SMART LRR_RI_2 386 413 - -
Sto6g4363 597 SMART LRR_RI_2 301 328 - -
Sto6g4363 597 SMART LRR_RI_2 442 469 - -
Sto6g4363 597 SMART LRR_RI_2 217 244 - -
Sto6g4363 597 SMART LRR_RI_2 470 497 - -
Sto6g4363 597 SMART LRR_RI_2 358 385 - -
Sto6g4363 597 SMART LRR_RI_2 329 356 - -
Sto6g4363 597 SMART LRR_RI_2 245 272 - -
Sto6g4363 597 SMART LRR_RI_2 273 300 - -
Sto6g4363 597 SMART LRR_RI_2 414 441 - -
Sto6g4363 597 Gene3D Ribonuclease Inhibitor 318 466 IPR032675 -
Sto6g4363 597 Gene3D Ribonuclease Inhibitor 143 304 IPR032675 -
Sto6g4363 597 SUPERFAMILY RNI-like 309 585 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4363 K22614 - gmx:100784693 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4363 6 46199961 46206318 Sto6g4363 6 46199961 46206318 ECH