Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4350 ATGATTCGGGCCATACGTGCTTGTAAAACAGCAGCAGAAGAACGTACTGTTGTAAGAAAAGAGTGTGCTGCAATTCGTGATACAATTAACGAAAATGATCAAGACTATAGGCATCGGAATCTGGCTAAGCTGATGTTCATACACATGCTTGGATACCCAACACATTTTGGTCAAATGGAGTGCCTCAAGTTGATTGCATCTCCTGGATTTCCAGAGAAGAGAATAGGTTACCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAGGTTCTAATGTTGGTCACAAACTCGTTGAAACAGTATCCAGTTTCTATTAGAAATTCGTTTTGTTTCTGTATTCTCGCATTTTTTTATTCTGATTTCCAAACAAATCTTAACCACACAAATCAGTATATAGTTGGACTTGCTCTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGATTGCTTCAATTTCGAGATCCAAATGTCAGGAAAAAGGCAGCATTGTGCACTATAAGAATCATAAAGAAAGTTCCAGACTTGGcagaaaattttattaattccgCTGCTGGCTTACTAAGGGAGAAGCATCATGGAGTCTTGATCACTGGGGTTCAGCTTTGTACGGAGCTGTCTAAAGTTTGCGGAGAAGCCCTTGAATACTTTCGAATGAAATGCACAGAGGGTTTGGTCAGAAATCTCAAAGATCTAGTTAACAGTCCTTATTCTCCAGAGTATGACGTTGGGGGCATCACAGATCCTTTTCTTCATATTAGATTGCTTAAGCTTTTGCGAGTGCTGGGTGAAGGTGATGCTGATGCTAGTGACTGTATGAATGACATACTTGCCCAGGTGGCTACCAAGACTGAGTCAAATAAAGTAGCAGGGAATGCCATCTTATACGAGTGTGTTCAAACAATCATGAGTGTTGAAGATAATGGTGGCTTACGTGTACTTGCCATCAATATCCTTGGCAGATTCTTATCAAACCGTGACAACAATATCAGATATGTGGCATTAAACATGCTGATAAAGGCTGTGGCAGCTGATGCTCAGGCAGTGCAGAGGCATCGGGCAACAATTTTGGAATGTGTAAAGGATTCAGATGCCTCAATTCAAAAAAGAGCTCTTGAACTTGTTTACAGTCTTGTGAATGAAAGTAATGTTAAGTCCTTAACGAAAGAGCTAATTGATTATCTGGAAGTCAGTGATCAAGATTTCAGGGGTGACCTTACTTCCAAAATTTGCTCTATAGTTGCTAAGTTTGCCCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTTTCTGAGGCTGGAAATTTTGTCAAAGATGAAGTATGGCATTCTGTAATTGTTGTGATAAGCAATGCTTCTGACCTTCATGGATATACCGTAAGAGCATTATACAGGGCATTGCAAACATCAGTTGAACAGGAGAGTCTTGTTCGAGTTGCAGTGTGGTGCATTGGAGAATATGGTGACATTTTAGTTAAGAATGTTGGAATGCTTGACTTAGAAGATCCGATAACGGTGACTGAGTCAGATGCTCTTGATGTTGTAGAGATGACTGTAAAACGCCATGCATCAGATCTTACCACAAAAGCCATGGCTTTGGTTGCCCTGTTGAAACTCTGTTCACGTTTTCCATCTTGTTCAGAGAGGATCAGGAATGTAATCATTCAGTATAAAGGGAACCTTTTGCTTGAATTGCAGCAAAGATCTATAGAATTCAATAGAATTATTgcaaattatcaaaatattagGTCCATTCTTGTAGAAAGGATGCCAGTTTTAGATGAGGCAAATTTTGTTGGTCGAAGAGATGGTTCTTTGCCAGGCACAGCTTCTACGCCAACAGGACCTTCAGTTAATCTTCCAAATGGAGTTACCAAAACTTCTGTGGCTCCTCTTGTAGATCTGCTCGATTTAAATTCAGATGAGGCTCCTGCACCTAGTTCTTCTGGTGGTGATCTTCTTCAGGACCTTCTTGGCGTTGACTTGCCTTCAACATCGGAACAGTTCGGTTAG 2046 0.4018 MIRAIRACKTAAEERTVVRKECAAIRDTINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQYPVSIRNSFCFCILAFFYSDFQTNLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNVRKKAALCTIRIIKKVPDLAENFINSAAGLLREKHHGVLITGVQLCTELSKVCGEALEYFRMKCTEGLVRNLKDLVNSPYSPEYDVGGITDPFLHIRLLKLLRVLGEGDADASDCMNDILAQVATKTESNKVAGNAILYECVQTIMSVEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLIKAVAADAQAVQRHRATILECVKDSDASIQKRALELVYSLVNESNVKSLTKELIDYLEVSDQDFRGDLTSKICSIVAKFAPEKIWYIDQMLKVLSEAGNFVKDEVWHSVIVVISNASDLHGYTVRALYRALQTSVEQESLVRVAVWCIGEYGDILVKNVGMLDLEDPITVTESDALDVVEMTVKRHASDLTTKAMALVALLKLCSRFPSCSERIRNVIIQYKGNLLLELQQRSIEFNRIIANYQNIRSILVERMPVLDEANFVGRRDGSLPGTASTPTGPSVNLPNGVTKTSVAPLVDLLDLNSDEAPAPSSSGGDLLQDLLGVDLPSTSEQFG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4350 681 Gene3D - 1 605 IPR011989 -
Sto6g4350 681 PIRSF AP1_gamma 1 680 IPR017107 GO:0005794|GO:0016192|GO:0030121
Sto6g4350 681 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 1 681 - -
Sto6g4350 681 MobiDBLite consensus disorder prediction 614 634 - -
Sto6g4350 681 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 1 681 - -
Sto6g4350 681 SUPERFAMILY ARM repeat 13 604 IPR016024 -
Sto6g4350 681 Pfam Adaptin N terminal region 15 589 IPR002553 GO:0006886|GO:0016192|GO:0030117
Sto6g4350 681 MobiDBLite consensus disorder prediction 618 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4350 Sto-Chr6 46111078 46117431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4350 K12391 - qsu:112015360 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4350 6 46111078 46117431 Sto6g4350 6 46111078 46117431 ECH