Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4335 ATGGAGGAAGCCATGAAGCTTCCACTGAACCTTGACTGTCATACATCCTTGTCTATCCAAGACGACGacgaccaaccaccacccatgCTGGTCCTCAGCCCTTCTTCTAGCAAAACCACCGATTCTCTCGGAGAACCCCGACAATCCTCTAATATGGATCCCCACGGCCTACAGCATCTAAGGGATCACGAGCTTACAGAGTCCATTCAGAGCAAAAAGCACACCTTGGAAACCATGGGTGGGAATTTGCCTGACAAAGGTGAGAAACTTCGAGCCACCATCAAGCGCTATGAAGACGAGCTGGCTCGCAGGAAATTGAGGCTCCCTCAGAAGGAAGTTGATGAAAGTGAGAAGCCCAGACAAGCTACAGCCTCAAGTATTGTTGGTGTATCTGATGGCTTGAAAAAAGAGAATATGTTGTCCCAAGCACCATCAGAATCCTCATTTGCATCttgtttttatgaaaaaatggaGCAAGATACTCCTTATCGGTCAGGTGATGCGTTGAAGACAGAGTTGTCACTTTTAAAGCACTGTGGCAACCAGAAAATGGAACACAATGGAGACTCTTCACAGAAGGGAAGAAAGAGAGATCAATCATCTTCAAGACAATTGCCATTTCAATGTGCAAGCAGTCTTTCCAAATGTGATACCTCTAATGATCATAAAAGGCGCAGAACAACTTCCACTCGTTCTCTGCACAACACGGAGAAAAATCTATCTGGCTGCCTTCCAAATATGAAGGATGCTTCTCAGGTAATTCAGTTGGATGATTCAAGATCTAGGAAGGGTCAGGCCATTGTTCTTGATGATGAGGATGAAACTCATCATCTGAAGAAAACATATCAAGAAGGCAAACTTACTGAATGCCCGAAAGAAGCCAAGATTTATTATCCATCAAGTGATGATCCAGAATGTGTTGAAATTTGCTATGCAGACATAGATTGCCTTGCCCCCGAAGGCTTTTTAACTTCAACTATTATGAACTTTTACATTCGTTACCTGCAGCAGCAAGCATCTCTGACAAATAGATCAATATCTGACTATCATTTTTTCAATACATATTTCTACAAGAAGCTTAAAGAGGCTGTTTCCTACAAGCGCAGTGACAGAGACACATTCTTTGCTAAGTTTAGAAGGTGGTGGAAGGGTGTAAATCTTTTTCAGAAGGCTCTTCACTGGAGTTTGGTCATTATTTCTTTCCCTGACAAAAAAGATGAATCCGGGCCAATCATACTTCATTTAGATTCTTTGCGTCTTCACTCTAGTCGATCAGTTTGTGAGAACATAAAAAGCTATTTGAAAGAGGAATGGAAATATGTTGACCGAGAATGTGCTTCTTCAGATATTCCCATTGCTGACAAAATATGGAAGAACCTTTCTCGTAGAATTGAAGATAAAGTCCTCACGGTTCCCCAACAGAAAAACGAGTATGACTGTGGTCTTTTTGTTCTGTACTTCATTGAGCGTTTCATTGAAGAGGCTCCTGAAAGACTGAAGAAGAAAGACTTAAATATGGTAAACCATCAACTCATCCCCAAGCTGCATATGCACAAGAAGCATTGTGTAAACCATCAACCCGCACCCGTACCTGTACCCGCACCCGTATTCATGCAACATAGTGGCTTACCTATTAAGAAGTACATCAATGTTCTTGACAATTCCTGGAAGAAGCAGGGAGCAGATTTTGATGGTTTTGAAGTGACATGGCTAAATCTTGAGCATTGA 1728 0.4115 MEEAMKLPLNLDCHTSLSIQDDDDQPPPMLVLSPSSSKTTDSLGEPRQSSNMDPHGLQHLRDHELTESIQSKKHTLETMGGNLPDKGEKLRATIKRYEDELARRKLRLPQKEVDESEKPRQATASSIVGVSDGLKKENMLSQAPSESSFASCFYEKMEQDTPYRSGDALKTELSLLKHCGNQKMEHNGDSSQKGRKRDQSSSRQLPFQCASSLSKCDTSNDHKRRRTTSTRSLHNTEKNLSGCLPNMKDASQVIQLDDSRSRKGQAIVLDDEDETHHLKKTYQEGKLTECPKEAKIYYPSSDDPECVEICYADIDCLAPEGFLTSTIMNFYIRYLQQQASLTNRSISDYHFFNTYFYKKLKEAVSYKRSDRDTFFAKFRRWWKGVNLFQKALHWSLVIISFPDKKDESGPIILHLDSLRLHSSRSVCENIKSYLKEEWKYVDRECASSDIPIADKIWKNLSRRIEDKVLTVPQQKNEYDCGLFVLYFIERFIEEAPERLKKKDLNMVNHQLIPKLHMHKKHCVNHQPAPVPVPAPVFMQHSGLPIKKYINVLDNSWKKQGADFDGFEVTWLNLEH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4335 575 MobiDBLite consensus disorder prediction 108 129 - -
Sto6g4335 575 MobiDBLite consensus disorder prediction 16 67 - -
Sto6g4335 575 Gene3D - 349 468 - -
Sto6g4335 575 MobiDBLite consensus disorder prediction 30 55 - -
Sto6g4335 575 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 57 510 - -
Sto6g4335 575 MobiDBLite consensus disorder prediction 201 216 - -
Sto6g4335 575 Pfam Ulp1 protease family, C-terminal catalytic domain 322 511 IPR003653 GO:0006508|GO:0008234
Sto6g4335 575 MobiDBLite consensus disorder prediction 217 232 - -
Sto6g4335 575 MobiDBLite consensus disorder prediction 182 200 - -
Sto6g4335 575 ProSiteProfiles Ubiquitin-like protease family profile. 307 491 IPR003653 GO:0006508|GO:0008234
Sto6g4335 575 SUPERFAMILY Cysteine proteinases 307 522 IPR038765 -
Sto6g4335 575 MobiDBLite consensus disorder prediction 182 241 - -
Sto6g4335 575 Gene3D - 298 519 - -
Sto6g4335 575 PANTHER UBIQUITIN-LIKE PROTEASE 4 57 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4335 Sto-Chr6 46021157 46029077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4335 K16287 - jre:109013697 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4335 6 46021157 46029077 Sto6g4335 6 46021157 46029077 ECH