Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4331 atgcaaAAACAACTCAGCCATATGAGcagtttcttcttccttctctttatCCTTTCCTCTTCTTTCAGTGTAAGCTCACTGTTTCCTTCTTTCACtgctAAGAACCCATTCACACCTAAGGCTTTCTTGATTCGTTATTGGGACAAGGAGATCCGAAACGGCCTGCCCAAGCCTTCCTTCCTGCTCTCCAAGGCCTCGCCATTAACCGCCGTGGACTCAGCGGCGTTTGCGAAACTCGCCGCCAGCAACGCCCTGTCCACGCGCCTCCCGGAATTCTGCTCCGCCGCCAAGCTCCTGTGTTTCCCCGATGTGGGACCCAGCTTGGAGAAGCACGATAAGGATTCCAACTTCGCTGTGTATCAGGATAAGAACTTTACCAACTATGGAACGGATCGGCTGGGAGGGATGGACTCTTTCAAGAACTACTCCGAGGATCAGAATATTCCGGTCAACAATTTCCGTCGGTACAGCCGCGACTCCACTGGTCACAAGGACAATTTCCTCAGCTACGGTTCCAACGGCAACGTGGTGGACCAGAGCTTCCACACCTACGCCGCCGGAGCAACGGGAGGCGCCGGTGAGTTCAAGAAGTACACCGATTCCACCAATGTCCCCAACCTCCAATTCGCCTCCTACTCCGACGATGCCAACGGGAGAGACCAATCGTTCTCTAGCTACAGCGAGAACGGAAATGCAGGGGACCAATCCTTCACCAACTATGGCAAACACGGGAATGGGGCCGTCAACGGTTTCACAAGCTACGGAACTAATTCCAACGTTGTCGGCTCGGGATTTTCCAATTATGGCGAGACGGCGAATGCTGCAAATGACACATTCAAGAACTACGGTGTGAATATGAACAACCCCACCAACAGTTTCAAGAACTACGACAATGGCGGTAATGGAGCTGTGGATAGCTTCGCTAATTACAGAGACCAAGCCAATGTGGGAGATGATTCCTTCCAATCCTATGCGAAAAATTCAAACGCGGCTAAAGTCGATTTCTCCAACTACGGGAAATCCTTCAATGAAGGTACGGACAGATTCACCGGGTACGGGAAAGGAGCTCAGGGGCATAAATTTGGGTTCAAAGGTTATGGGGTGAATAATACCTTCAAGGACTACGCGAAAGATGGAATCACATTCACAGGTTACACCAATGTGAGCTCCACTCTGAGTGCTTCAATGGCGAAATCGGGTGCTTCAATCAGTGccaatttggtaaaaaagtggGTAGAGCCGGGTAAATTCTTCCGTGAGTCCATGGTGAAGGAAGGGAGCGTGATGCCATTTCCAGATATCAGAGACAAAATGCCCAGAAGGTCGTTTCTGCCCCGATCTATTCTCTCAAAATTACCATTCTCGACCTCGAAGATCTCTGAACTGAAGCAGATTTTCAAAGTGTCGGATAATTCGTCGATGGACAAGATCCTAACGAGTTCGCTGAGCGAGTGCGAGAGGGCTCCAAGCGCAGGCGAGACGAAGCGCTGCGTGGGCTCACTGGAGGACATGATCGACTTCGCAACCTCCGTGCTGGGCCGCAACGTCGTCGTTCGGGCCACCCAAAACGTGAACGGGGCGAAGAAGGACGTGATGGTGGGTCGGGTCCAGAAAATCAACGGAGGTCGGATCACACAGTCCGTGTCTTGCCACCAGAGTCTCTTCCCTTACCTGCTTTACTACTGCCACTCGGTTCCCAAGGTCCGGGTGTACGAAGCGGATCTTCTGGACCCGAAGAGCAAAGGAAAGATCAACCACGGAGTTGCCATCTGTCACTTGGATACCAGTGCTTGGAGCCCCACCCATGGCGCCTTCCTGGCTCTTGGTTCGGGTCCGGGTCGGATCGAGGTGTGCCACTGGATCTTTGAGAACGACATGACCTGGACCATTGCTGATTGA 1899 0.5097 MQKQLSHMSSFFFLLFILSSSFSVSSLFPSFTAKNPFTPKAFLIRYWDKEIRNGLPKPSFLLSKASPLTAVDSAAFAKLAASNALSTRLPEFCSAAKLLCFPDVGPSLEKHDKDSNFAVYQDKNFTNYGTDRLGGMDSFKNYSEDQNIPVNNFRRYSRDSTGHKDNFLSYGSNGNVVDQSFHTYAAGATGGAGEFKKYTDSTNVPNLQFASYSDDANGRDQSFSSYSENGNAGDQSFTNYGKHGNGAVNGFTSYGTNSNVVGSGFSNYGETANAANDTFKNYGVNMNNPTNSFKNYDNGGNGAVDSFANYRDQANVGDDSFQSYAKNSNAAKVDFSNYGKSFNEGTDRFTGYGKGAQGHKFGFKGYGVNNTFKDYAKDGITFTGYTNVSSTLSASMAKSGASISANLVKKWVEPGKFFRESMVKEGSVMPFPDIRDKMPRRSFLPRSILSKLPFSTSKISELKQIFKVSDNSSMDKILTSSLSECERAPSAGETKRCVGSLEDMIDFATSVLGRNVVVRATQNVNGAKKDVMVGRVQKINGGRITQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPKSKGKINHGVAICHLDTSAWSPTHGAFLALGSGPGRIEVCHWIFENDMTWTIAD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4331 632 MobiDBLite consensus disorder prediction 209 238 - -
Sto6g4331 632 Pfam BURP domain 417 629 IPR004873 -
Sto6g4331 632 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 632 - -
Sto6g4331 632 ProSiteProfiles BURP domain profile. 417 631 IPR004873 -
Sto6g4331 632 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 632 - -
Sto6g4331 632 SMART BURP_2 415 631 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4331 Sto-Chr6 45999975 46002003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4331 - - gmx:100776642 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4331 6 45999975 46002003 Sto11g1112 11 11169701 11173322 CCT
Sto6g4331 6 45999975 46002003 Sto6g4331 6 45999975 46002003 ECH