Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4328 ATGAAGTCTGGATTGCAAGTAGGAGGAATTATGTGCAAGGAGTTTGTGGAAGAACATGATGTAAGTGACGTCAAGGTTAAGAAGTGTGATGGAGCAGAAAGGAGCGATCAAAGGTATAAAATTCCAGTTTCTTTTGCTCTTTCTTCCTCCCTCTTTTGTTGGGGTTGGGGAGACAGAATgcatatttattttagCTTAATGACCTACGGTGATAAAACAGCTGGGATTTCATCTTTCAGAATTGTGGACTCATGTAGTAGTTGCTTCCCACTGGAGTTTTGTTATCCAGTAGTTTCCATTCATAAAGTTACTCAGTCTTCGCCTTCTCCTGTACTCTCTTTTGTAGAGAGAGTGCCTCAAGAGACTCAAACTTCTCATATAACAGCTGTTGATTCAGAACATGGATACCTGAAGTCAGAAAATGAGTCAACTTCTTCTAAGACCATACGAGATGTACATATTTCAATGAGGTTAATGGAGGACTTTCTTGAGCTTGCTAAAGAGAATACGGAAAAGGATCTAGAAACATGCGGTATACTAGGAGCCTTCCTGTGTCTGGCCACAAACGAGGAGGACGTCTTTGCAATTCTAAATGAAAGATCCCTTTTCCCTGTGGGATGGATCCATACTCATCCTTCTCAAAATTGTTTCATGTCTTCGGTGGATCTGCACACTCAATATTCATACCAGATAATGGTTCCTGAGGCTTTTGCCATTGTCCTCGCTCCAAAAGACACCTCAAGGAGCTGCGGTCTGTTTCGCATTACTGAGCCTGATGGAATGAGTATTCTCAAAGGTTGTCAAGAGACGGGATTTCATCCACACAAAGAACCAGAAAATGGGAATCCCATGTATGAGCACTGCTCTAATGTGTACAAAAACTCCAATCTGAGGTTTGAAATCTTTGATTTGCGCTGA 918 0.4118 MKSGLQVGGIMCKEFVEEHDVSDVKVKKCDGAERSDQRYKIPVSFALSSSLFCWGWGDRMHIYFSLMTYGDKTAGISSFRIVDSCSSCFPLEFCYPVVSIHKVTQSSPSPVLSFVERVPQETQTSHITAVDSEHGYLKSENESTSSKTIRDVHISMRLMEDFLELAKENTEKDLETCGILGAFLCLATNEEDVFAILNERSLFPVGWIHTHPSQNCFMSSVDLHTQYSYQIMVPEAFAIVLAPKDTSRSCGLFRITEPDGMSILKGCQETGFHPHKEPENGNPMYEHCSNVYKNSNLRFEIFDLR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4328 305 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 189 234 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto6g4328 305 ProSiteProfiles MPN domain profile. 128 261 IPR037518 -
Sto6g4328 305 Gene3D Cytidine Deaminase, domain 2 129 183 - -
Sto6g4328 305 Gene3D Cytidine Deaminase, domain 2 184 305 - -
Sto6g4328 305 SUPERFAMILY JAB1/MPN domain 152 259 - -
Sto6g4328 305 PANTHER AMSH-LIKE PROTEASE 101 305 - -
Sto6g4328 305 CDD MPN_AMSH_like 149 305 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Sto6g4328 305 PANTHER FI19924P1 101 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4328 Sto-Chr6 45968771 45972282 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4328 K11866 - gmx:100807282 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4328 6 45968771 45972282 Sto6g4328 6 45968771 45972282 ECH