Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4325 ATGGCGGCTTCTGATGATGTTGCCCACGACATTCAATCTCTCCTCTCTTCATCCAACAGGGACTACCTCCTTCGCAACAACGATGATCAGGTTAAAATTGAGAGtttgaaaggaaagaaaattggTTTATATTTCTCAGCATCTTGGTGCGGTCCGTGCCGACGATTTACTCCTACCTTGGTGGAGTTGTACAATCAAGTGTCTACCAAAGGTGAGTTTGAAGTAATCTTTGTGTCAGCGGATGAAGACGATGAAGCCTTCAAAGCTTACTTTTCCAAGATGCCATGGCTTGCCATCCCATATTCTGATTCCGACACACGCAGTCGCCTTGATGAGGTGTTCAAGGTTAATGGAATCCCCCACCTCGTAATTCTCGACGCCGATGGGAAAGTGGCCACTGAAAGTGGCGTTGAGGTTGTGAGAGAGTATGGAGTTGAAGCATACCCCTTCACCTCAGAAAGGATCCAAGAGTTGAGAGATGAGGAAGAGGAAGCCAAGAAGAACCAGTCCTTGAGATCTATTTTGGTCTCAAAGTCACGTGACTTCCTCGTAACCAGTGATGGAAAGCAGGTACCTGTTTCTGAGCTTGAGGGGAAGACAGTGGGTCTGTATTTCTCATTGTTTTCCTACGGATCATGCGTTGAATTTACTCCACAGCTTGTGGAGGTTTGTGAGAAGCTGAAGGCCAAAGGTGAGAAGTTTGAGGTTGTATTGGTGCCTCTGGATAATGATGAGGAATCTTTCAAGGAAGGACTTAAAAGTGTGCCCTGGTTGTCATTGCCTTTCAAGGACAAGAGCTGTGAGAAACTGGCTCGCTACTTTGAGCTATCCACCCTGCCTACTTTAGTTATTATTGGAGCAGATGGTAAGACCCTTCATACCAATGTCGCTGAGACCATTCAAGATCATGGGGTTGATGCTTACCCTTTCACTCCTGAGAAATTTGCTGAGCTCGTTGAGATTGAGAAGGCCAAAGAGGCTTCTCAAACCCTTGAGTCTATTCTGGTTTCAGGGGATCTTAATTTTGTGATAGGGAAAGATGGTGTCAAGaTTCCAGTGTCAGATTTGGTAGGGAAGACCGTCCTGCTCTACTTCTCAGCCCATTGGTGTCCTCCATGCCGTGCTTTCCTACCAAAGCTCATTGAAGCATACAACAAGATCAAGGCTAATGACAAGAATGCCTTGGAAGTGGTCTTCATCTCAAGCGATAGGGACCAAGCCTCATTTGATGACTTCTTTGCAGGAATGCCATGGCTGGCTCTTCCCTTTGGTGACTCCAGGAAGGCATTCCTCAGTCGAAAATTCAAAGTACAGGGCATCCCCATGCTGGTGGCCATCGGACCGAGCGGCCGGACCGTGACGAAAGAAGCCAGAGACTTGGTGATGCTTCATGGCGCAGAAGCTTATCCTTTCACGGAGGAGAGGGTGAAGGAAATAGAGGCAGCAACGGAAGAGATGGCAAAGGGGTGGCCTGAGAAGGTGACGCACGGTTCCCATGAGCATGAGCTTGTGTTGACTCGCCGTAGGATTTATAACTGTGATGGTTGTGACGAGGAGGGTCACGCATGGTCGTATTACTGTGATGACTGTGACTTTGATCTGCATCCAAAATGTGCATTGGAGGAAGACAAACCCAAAGAGGCAGAAGAAGAGAATAAACCAGATGGATGGGTTTGTGACGGAGATGTCTGCACTAAAGCTAAAGCCTGA 1710 0.4708 MAASDDVAHDIQSLLSSSNRDYLLRNNDDQVKIESLKGKKIGLYFSASWCGPCRRFTPTLVELYNQVSTKGEFEVIFVSADEDDEAFKAYFSKMPWLAIPYSDSDTRSRLDEVFKVNGIPHLVILDADGKVATESGVEVVREYGVEAYPFTSERIQELRDEEEEAKKNQSLRSILVSKSRDFLVTSDGKQVPVSELEGKTVGLYFSLFSYGSCVEFTPQLVEVCEKLKAKGEKFEVVLVPLDNDEESFKEGLKSVPWLSLPFKDKSCEKLARYFELSTLPTLVIIGADGKTLHTNVAETIQDHGVDAYPFTPEKFAELVEIEKAKEASQTLESILVSGDLNFVIGKDGVKIPVSDLVGKTVLLYFSAHWCPPCRAFLPKLIEAYNKIKANDKNALEVVFISSDRDQASFDDFFAGMPWLALPFGDSRKAFLSRKFKVQGIPMLVAIGPSGRTVTKEARDLVMLHGAEAYPFTEERVKEIEAATEEMAKGWPEKVTHGSHEHELVLTRRRIYNCDGCDEEGHAWSYYCDDCDFDLHPKCALEEDKPKEAEEENKPDGWVCDGDVCTKAKA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4325 569 SUPERFAMILY Thioredoxin-like 24 132 IPR036249 -
Sto6g4325 569 Pfam C1 domain 498 539 IPR004146 -
Sto6g4325 569 Gene3D Glutaredoxin 14 152 - -
Sto6g4325 569 Gene3D Glutaredoxin 173 311 - -
Sto6g4325 569 Gene3D Glutaredoxin 330 472 - -
Sto6g4325 569 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 540 - -
Sto6g4325 569 SUPERFAMILY Thioredoxin-like 183 294 IPR036249 -
Sto6g4325 569 Pfam Thioredoxin-like 198 290 IPR012336 -
Sto6g4325 569 Pfam Thioredoxin-like 358 451 IPR012336 -
Sto6g4325 569 Pfam Thioredoxin-like 38 131 IPR012336 -
Sto6g4325 569 CDD TryX_like_TryX_NRX 341 471 IPR045870 GO:0004791
Sto6g4325 569 ProSiteProfiles Thioredoxin domain profile. 1 160 IPR013766 -
Sto6g4325 569 PANTHER THIOREDOXIN 4 540 - -
Sto6g4325 569 ProSitePatterns Thioredoxin family active site. 362 380 IPR017937 -
Sto6g4325 569 Coils Coil 148 168 - -
Sto6g4325 569 CDD TryX_like_TryX_NRX 21 150 IPR045870 GO:0004791
Sto6g4325 569 ProSiteProfiles Thioredoxin domain profile. 318 481 IPR013766 -
Sto6g4325 569 SUPERFAMILY Thioredoxin-like 344 454 IPR036249 -
Sto6g4325 569 SUPERFAMILY Cysteine-rich domain 490 540 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4325 Sto-Chr6 45946718 45948965 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4325 K17609 - gmx:100809224 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4325 6 45946718 45948965 Sto6g4325 6 45946718 45948965 ECH