Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4322 ATGCGAATTCTGATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATTTTGTACAAGCTCAAGCTTGGAGAGATCGTCACAACAATTCCTACAATTGGGTTCAATGTGGAGACCGTGGAATACAAAAATATTAGCTTCACTGTTTGGGATGTTGGTGGTCAAGACAAGATTCGCCCCCTGTGGAGGCACTACTTTCAGAACACACAAGGTCTTATATTTGTTGTAGATAGCAATGACAGGGATAGAGTTGTTGAGGCCAGAGATGAGTTGCATAGGATGTTGAATGAGGATGAATTGAGAGATGCGGTGTTGCTTGTATTTGCTAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAAATCACTGACAAGTTGGGTCTCCACTCTCTCAGGCAGCGCCATTGGTACATCCAGAGTACTTGCGCAACCTCTGGAGAGGGCCTTTATGAGGGTTTGGATTGGCTTTCCAACAACATAGCCAACAAGGTAGCAATGCTTGATGCGCTTCTTTTGGAATGGCTATTCTGGATGCAGGGGTGA 543 0.4475 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKVAMLDALLLEWLFWMQG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4322 180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 162 IPR027417 -
Sto6g4322 180 Pfam ADP-ribosylation factor family 1 160 IPR006689 GO:0003924|GO:0005525
Sto6g4322 180 ProSiteProfiles small GTPase Arf family profile. 1 160 - -
Sto6g4322 180 SMART arf_sub_2 1 164 - -
Sto6g4322 180 TIGRFAM small_GTP: small GTP-binding protein domain 1 140 IPR005225 GO:0005525
Sto6g4322 180 PANTHER ADP-RIBOSYLATION FACTOR 2-LIKE 1 163 - -
Sto6g4322 180 CDD Arf1_5_like 1 159 IPR045872 GO:0003924
Sto6g4322 180 PRINTS GTP-binding SAR1 protein signature 2 25 IPR006689 GO:0003924|GO:0005525
Sto6g4322 180 PRINTS GTP-binding SAR1 protein signature 30 54 IPR006689 GO:0003924|GO:0005525
Sto6g4322 180 PRINTS GTP-binding SAR1 protein signature 57 82 IPR006689 GO:0003924|GO:0005525
Sto6g4322 180 PRINTS GTP-binding SAR1 protein signature 102 123 IPR006689 GO:0003924|GO:0005525
Sto6g4322 180 Gene3D - 1 169 IPR027417 -
Sto6g4322 180 SMART rab_sub_5 1 167 - -
Sto6g4322 180 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 163 IPR024156 GO:0005525
Sto6g4322 180 SMART sar_sub_1 1 160 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4322 Sto-Chr6 45936133 45937908 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4322 K07937 - cit:102607656 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4322 6 45936133 45937908 Sto6g4322 6 45936133 45937908 ECH