Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4320 ATGGCAGAGAAGGACCTAGACACAATGAGGAGGAGGGTGGCCTCTGTAGCCAACCACCTCATcccctctcactctcactcGGCGCCTTCGCCTTCTTTATGTTATGGGACAGTGGGGTTGTCTAACACTTGTATGAATGATAGCTACCACAGGGTTCATGGTGAAATTCCCTCCCACGACGTCGTTTGGAGGATTGCTTCCGATGACTCTGGCAAGGAGTTTACTGACATTGTATACGAGAAGGCTGAAGGTGAAGCAATAGCAAAGATTACAATTAATAGGCCAGAGAGAAGAAATGCTTTCCGGCCCCACACCATTAAGGAGCTCATTCGTGCTTTCAATGACGCTAGGGATGATAGCTCTGTGGGGGTCATCATTCTTACTGGCAAGGGAACCAAGGCATTCTGCAGTGGTGGTGACCAGGCTTTAAGGACCGAAGATGGTTACGCTGACTATGAGAATTTTGGTCGACTTAATGTGTTAGATTTGCAGGTGCAAATCCGGCGTCTTCCAAAACCAGTAATTGCAATGGTAGCAGGTTATGCTGTTGGAGGAGGACATGTACTACACATGGTCTGTGATCTAACCATTGCAGCAGATAATGCTATCTTTGGCCAAACTGGTCCTAAGGTAGGAAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCCCGTTTGGTAGGACCAAAGAAAGCACGTGAAATGTGGTTCCTTTCAAGGTTCTACAGTGCTGTTGAAGCAGAGAAAATGGGGCTTGTGAATACCGTTGTGGCACTAGAGAATTTAGAGAAAGAAACAGTAAAATGGTGTCGGGAGATACTGAGGAACAGCCCAACTGCAATTCGAGTTCTTAAGTCAGCTCTGAATGCAGTGGATGATGGGCATGCAGGACTCCAGGAACTGGGTGGAAATGCCACACTCATTTTTTATGGCACTGAGGAAGCTAACGAGGGAAAGACAGCTTATATGCAACGAAGACGTCCCGACTTTTCAAAGTTTCATCGCAGACCTTAA 1014 0.4566 MAEKDLDTMRRRVASVANHLIPSHSHSAPSPSLCYGTVGLSNTCMNDSYHRVHGEIPSHDVVWRIASDDSGKEFTDIVYEKAEGEAIAKITINRPERRNAFRPHTIKELIRAFNDARDDSSVGVIILTGKGTKAFCSGGDQALRTEDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLSRFYSAVEAEKMGLVNTVVALENLEKETVKWCREILRNSPTAIRVLKSALNAVDDGHAGLQELGGNATLIFYGTEEANEGKTAYMQRRRPDFSKFHRRP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4320 337 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 175 195 IPR018376 GO:0003824
Sto6g4320 337 SUPERFAMILY ClpP/crotonase 73 332 IPR029045 -
Sto6g4320 337 Gene3D - 277 325 IPR014748 -
Sto6g4320 337 Gene3D - 59 276 - -
Sto6g4320 337 TIGRFAM menB: naphthoate synthase 74 333 IPR010198 GO:0008935|GO:0009234
Sto6g4320 337 CDD crotonase-like 77 273 - -
Sto6g4320 337 Pfam Enoyl-CoA hydratase/isomerase 84 331 IPR001753 GO:0003824
Sto6g4320 337 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 63 336 IPR010198 GO:0008935|GO:0009234
Sto6g4320 337 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 7 337 IPR010198 GO:0008935|GO:0009234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4320 Sto-Chr6 45930526 45932568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4320 5 337 Acyl Lipid Metabolism Gene Families AT1G60550 77.811 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4320 K01661 - pvy:116118368 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4320 6 45930526 45932568 Sto6g4320 6 45930526 45932568 ECH