Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4316 ATGTTGGGTGCCAACAATGGTAATACTATGCTTCCTGTTTTCTTGGACGAGAACCAGTTACAGTATCAAACTAATGCAGCAAATCAACTGCAGTTGTTTGGAAACTTACAAGCTGGATGTAGTGTTGATCCAGTTAATTACTTTGGAAATGAGCATATGAGTTCCATGATTCGGCCAAACAAACGAagcagggaaatggaagataTTTCAAAGCAGCAAAGGCTTCAAATTTCCTTAAATTACAATGTCTGTCAAGATGAACCTGATCGATCAGCAAGCATTCCAAACCCGAACCCAAACCCTGTGTCAACAGGATTGAGGCTGgcttatgatgatgatgaacgTAACTCATCTGTTACTTCTGCTAGTGGCAGCATGACAGGCGCACCTTCCATCATATTATCCCTTGGTGACAATATTAGAACTGAGCTTGATAGGCAGAAAGAAGAATTGGACCAGTATATTAAACTCCAGAAGGAACAATTGTCAAAAGGTGTGAGAGACATGAAACATAAGCACATGACTTCTCTCCTTGCTGCCATTGAGAAAGGTGTAAGCAAGAAGTTAAGGGAAAAAGATGTGGAAATAGAGAACATGAACCGTAAAAACCGAGAGCTAGCAGAGAGAATAAAGCAGGTGGCTATGGAAGCACAAAATTGGCATTACAGAGCAAAATACAACGAGTCAGTTGTGAATGTTCTAAAGAACAATCTCCAACAGGCAATCTCTCAAGGAGTTGAACAAGGGAAGGAAGGGTTTGGAGACAGTGAAGTTGATGATGCTGCCTCATACATTGACCCCAATAACTTGCTGAGTATCCATGGTATCCCAGGGAAATCATCTAACAAGAAGCAAGGAATAGAGGATCATATGATTTGCAGAGCATGCAAGGCCAAGGAGGTTTCGATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGATTGTGATGGATTTGTCAATGTTTGTCCTGTATGCCAACTTATAAAATCTGCTAGTGTCCAAGTGTATCTGTCTTAA 1023 0.3969 MLGANNGNTMLPVFLDENQLQYQTNAANQLQLFGNLQAGCSVDPVNYFGNEHMSSMIRPNKRSREMEDISKQQRLQISLNYNVCQDEPDRSASIPNPNPNPVSTGLRLAYDDDERNSSVTSASGSMTGAPSIILSLGDNIRTELDRQKEELDQYIKLQKEQLSKGVRDMKHKHMTSLLAAIEKGVSKKLREKDVEIENMNRKNRELAERIKQVAMEAQNWHYRAKYNESVVNVLKNNLQQAISQGVEQGKEGFGDSEVDDAASYIDPNNLLSIHGIPGKSSNKKQGIEDHMICRACKAKEVSMLLMPCRHLCLCKDCDGFVNVCPVCQLIKSASVQVYLS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4316 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 340 IPR013083 -
Sto6g4316 340 Pfam Zinc finger, C3HC4 type (RING finger) 291 328 - -
Sto6g4316 340 Coils Coil 189 216 - -
Sto6g4316 340 PIRSF SBP1_RNase_bind 1 340 IPR017066 -
Sto6g4316 340 ProSiteProfiles Zinc finger RING-type profile. 293 328 IPR001841 -
Sto6g4316 340 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 339 IPR017066 -
Sto6g4316 340 Coils Coil 141 161 - -
Sto6g4316 340 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4316 Sto-Chr6 45912968 45914958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4316 292 328 Miscellaneous Gene Families AT2G21380 43.243 1.17e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4316 K19042 - mnt:21410357 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4316 6 45912968 45914958 Sto6g4316 6 45912968 45914958 ECH