Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4309 ATGAATCCTTTTTCATTGGTCAATGAAAAGCCTTGTCCTTTGGATATGAGAGGCGAGCTAGATGGCACTGCTGCTTTCATGAACTTCAAAAAATGGGGAAACATTGAATTTCCAATGCCATTTGGAAGAGTGATGAATCCCACAGAGTGTCTTATTCATGGATTAGATGAAAGGGTGACCTGGGGAGGTGCTAGTGTTATTTATGCTGATACGGTTGGAGATCTTGGCTATGCATCTGAGCTCGGAAACTATGCAGAATATAGTGGAGCTCCCAATGAAGAGCAAGTCTTACACCTTAAAGGAGAAGGTAAGCATAGCGGTATCATCATTGAACTTAGCTCCATTGTAGAAGAGTTAACACAAAATGTTTACGGTATATGCAAACAGGCAATCCAGTGCATCACTGCAGCTGCTTGA 417 0.4197 MNPFSLVNEKPCPLDMRGELDGTAAFMNFKKWGNIEFPMPFGRVMNPTECLIHGLDERVTWGGASVIYADTVGDLGYASELGNYAEYSGAPNEEQVLHLKGEGKHSGIIIELSSIVEELTQNVYGICKQAIQCITAAA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4309 138 PANTHER - 1 59 - -
Sto6g4309 138 PANTHER - 59 98 - -
Sto6g4309 138 Gene3D - 1 41 - -
Sto6g4309 138 Gene3D - 58 100 IPR016102 -
Sto6g4309 138 Pfam ATP citrate lyase citrate-binding 59 99 IPR032263 -
Sto6g4309 138 PANTHER ATP-CITRATE SYNTHASE 59 98 - -
Sto6g4309 138 PANTHER ATP-CITRATE SYNTHASE 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4309 Sto-Chr6 45883126 45884174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4309 1 98 Acyl Lipid Metabolism Gene Families AT1G60810 68.376 1.59e-49 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4309 K01648 - sind:105168275 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4309 6 45883126 45884174 Sto6g4309 6 45883126 45884174 ECH