Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4276 ATGAAGTTTATGAAACTGGGATCTCGTCCTGATACCTTCTACACTGCAGAAGCAGTCAGGTCAGTCTCTTCTGAAGTATCCAGCGACCTAATAATCCAAGTGAAAGGAAGTAGATATCTTCTTCACAAGTTCCCCCTACTGTCCAAATGCTTGCGCCTGCAAAGGATATGCTCAGAATCTCCTGACTCTTCTCTGCACCAAATAGTCCAACTCCCTGATTTCCCTGGTGGGGTGGAGGCATTTGAATTGTGTGCTAAGTTCTGCTATGGTATCACTGTCACTCTAAGTGCCTACAACGTTGTAGCTGCAAGATGTGCTGCAGAATACCTACAGATGACAGAGGATGTTGAGAAGGGGAACTTGATTTACAAGCTTGAGGTTTTCTTCAATTCCTGCATTCTTCATGGGTGGAAGGATTCTATTGTTGCTCTTCAGAGCACCAAAGCATTGCCTTTGTGGTCAGAGGACTTGGGAATCACTAGCAGATGCATTGAAGCAATTGCCTCCAAGGTGTTAAGTCACCCCTCAAAGGTGAGTTTGTCACATAGTCATTCCAGAAGGGCCAGGGACGATGTGTCTTGCAATGGAACTGATAGTCAGAGACATAAATCAGCAAGTAAAGGATGGTGGGCTGAAGATGTAGCAGAATTGAGCATAGACCTCTTCTGGAGAACCATGATAGCAATTAAATCAGGTGGAAAGATGCCCTCAAATCTCATAGGGGATGTACTCAAGATTTATGCATCTCGATGGCTGCCCAATATCTCGAAGAATGGTCATGTCAATGATAAACAAACAATTCCTGATTCTGATTCAGACTCAGCAAATGAAAGAACCTCGAAGCATCGCTTGCTTTTGGAATCAATTGTAAGCTTGCTTCCTGCAGAGAAAAGTGCCGTTTCTTGTAGTTTTCTTCTTAAACTCATGAAGGCAGCCAATATTCTGAATGCTTCTTCCTCTTCAAAGATGGAATTAGCTAGAAGGGTAGGGCTTCAGCTGGAGGAAGCCACAGTGAATGATCTTTTAATACCTTCAGTATCTTATGCAAATGATACTCTCTATGATGTTGAGTTGGTGATGACTATATTGGAACAATTTATGTTACAAGGTCAGAGTCCCCCAACCAGCCCTCCACGATCCAGGCTTGGTTTTGAAAGAAGAAGGTCTCGTTCAGCAGAGAATATTGACTTTGAATTCCAGGAGAGTAGAAGGTCTTCTTCAGCATCTCATAGTTCAAAATTGAAGGTAGCAAAGCTTGTGGATAGGTATCTTCAAGAGGTTGCCAGAGATGTGAATTTGCCTTTATCAAAGTTCATTGCGCTTGCTGAAACTATCCCAGACTTTGCAAGACATGATCATGATGATCTCTACAGAGCTATTGACATCTATCTCAAGGCTCATCCAGAACTCAACAAGAGCGAAAGGAAGAGACTATGTAGAATCCTTGACTGCAAAAAACTGTCTATGGAGGCCTGCATGCATGCAGCACAGAATGAGCTTCTCCCCCTAAGGGTGGTTGTCCAAGTTCTCTTCTTTGAGCAAGCTCGAGCCGCCGCGGCTGGTGGAAAAGTGACTAACCTGCCAAGTAACATCAAGGCACTACTTACTGCACACGGGATTGACCCATCAAAACACACAGCTCCATTAAGCACTACTACAAGCGTACATGCAGAAGATCAATGGAGTGTGTCTGGCTTCAAGTCACCAAAGTCTAGAACTTCAACTCTTAGGATGAAGCTAGCGGAGGATGATGATTTAGACGAAAATGACATGCCCCGGGATGGAATTGGAAGAAGGTCTAAGTTTAAGGCTCTCTGTGCTCTTCCTACTCAACCCAAGAGAATGCTTAGTAAGCTATGGTCCAACAATAGAAGCGCCAATGagaagaaatga 1893 0.4363 MKFMKLGSRPDTFYTAEAVRSVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQRICSESPDSSLHQIVQLPDFPGGVEAFELCAKFCYGITVTLSAYNVVAARCAAEYLQMTEDVEKGNLIYKLEVFFNSCILHGWKDSIVALQSTKALPLWSEDLGITSRCIEAIASKVLSHPSKVSLSHSHSRRARDDVSCNGTDSQRHKSASKGWWAEDVAELSIDLFWRTMIAIKSGGKMPSNLIGDVLKIYASRWLPNISKNGHVNDKQTIPDSDSDSANERTSKHRLLLESIVSLLPAEKSAVSCSFLLKLMKAANILNASSSSKMELARRVGLQLEEATVNDLLIPSVSYANDTLYDVELVMTILEQFMLQGQSPPTSPPRSRLGFERRRSRSAENIDFEFQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNLPLSKFIALAETIPDFARHDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVTNLPSNIKALLTAHGIDPSKHTAPLSTTTSVHAEDQWSVSGFKSPKSRTSTLRMKLAEDDDLDENDMPRDGIGRRSKFKALCALPTQPKRMLSKLWSNNRSANEKK 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4276 630 ProSiteProfiles NPH3 domain profile. 208 516 IPR027356 -
Sto6g4276 630 PANTHER OS12G0117600 PROTEIN 1 627 IPR043454 -
Sto6g4276 630 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 627 - -
Sto6g4276 630 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Sto6g4276 630 MobiDBLite consensus disorder prediction 369 388 - -
Sto6g4276 630 MobiDBLite consensus disorder prediction 183 197 - -
Sto6g4276 630 MobiDBLite consensus disorder prediction 178 201 - -
Sto6g4276 630 Pfam NPH3 family 209 492 IPR027356 -
Sto6g4276 630 SUPERFAMILY POZ domain 21 115 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4276 Sto-Chr6 45660975 45663792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4276 26 540 EF-hand Containing Proteins AT3G44820 35.478 3.48e-94 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4276 - - gmx:100797361 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4276 6 45660975 45663792 Sto6g4276 6 45660975 45663792 ECH