Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4183 ATGGCACCCTCATTCTACGATCCAAGCGCAACCACCGTGTGCGTCATGGACGCTTCCCCCCACCTTGGCTTCAATCTCGTCAACCGACTCTTACAGAGGGGCTACACCGTCCACGCCTCCGTTCAAGACCATGCAGGGGAAGAGCAATTCAGGGGGATTTCTGCGGATTCTCATAAGCTCAAGATTTTCCGATCAGACCCCTTTGATTACCATAGCATCATCGACGCGCTTAAAGGTTGCTCTGGACTGTTCTACAATTTTGAGCCTCCTCAGGATCAGCCCAACTATGATGAATACATGGCGGATGTAGAGGTGAGAGCTGCACATAACGTGCTTGAAGCTTGTGCTCAAACGGAAACCATTCAAAAAGTGGTTTTTACATCATCGGCAACGGCAGTGGTATGGAGGGAGGATCGCAAGTCTCTGGAATTAGACTTGGACGAGAGACATTGGAGCGATGTTAATTTATGTCGTAAGTTCAAGTTATGGCAGGGGATGTCAAAGACACTAGCAGAGAAGACAGCATGGGCGTTGGCTATGGATCGTGGTGTGAACATGGTGTCCATTAATGGTGGGTTGTTGATGGATGATGACCTCTCCATCACCACCCCTTATTTGAGAGGAGCAGCGGAGATGTACGAGGATGGAGTGTTCGTGACCGTTGATATGGAGTTCTTGGTGGATGCTCACATCTGTGTCTTTGAAGATGTCTCATCCTACGGTCGCTATTTGTGCTTTAATCACATCATCAACACTCACCATGACGCCATTCATCTCGCCCGCAAGTTGACCCCTTCTGCTCCTAATTCAATGCCCCAAAGGTCACTCTTTAACAGTGATGAGGATAAAAGGTTCATTGAACAGAGAATAAGCAACAAGAAGTTGAACAAATTGATGGTTGACTTTGAGGCTTGA 915 0.4776 MAPSFYDPSATTVCVMDASPHLGFNLVNRLLQRGYTVHASVQDHAGEEQFRGISADSHKLKIFRSDPFDYHSIIDALKGCSGLFYNFEPPQDQPNYDEYMADVEVRAAHNVLEACAQTETIQKVVFTSSATAVVWREDRKSLELDLDERHWSDVNLCRKFKLWQGMSKTLAEKTAWALAMDRGVNMVSINGGLLMDDDLSITTPYLRGAAEMYEDGVFVTVDMEFLVDAHICVFEDVSSYGRYLCFNHIINTHHDAIHLARKLTPSAPNSMPQRSLFNSDEDKRFIEQRISNKKLNKLMVDFEA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4183 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 268 IPR036291 -
Sto6g4183 304 CDD FR_SDR_e 13 300 - -
Sto6g4183 304 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 18 135 IPR002225 GO:0003854|GO:0006694|GO:0016616
Sto6g4183 304 Gene3D - 4 304 - -
Sto6g4183 304 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 9 303 - -
Sto6g4183 304 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4183 Sto-Chr6 45093529 45096187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4183 13 302 Miscellaneous Gene Families AT5G19440 30.897 1.02e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4183 - - gmx:100793329 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4183 6 45093529 45096187 Sto6g4183 6 45093529 45096187 ECH