Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4158 ATGGAAGCGAAGATCGAAAAGGCGTTGGATAGGGTTGTGCTCAATCTGAAACGAAAACGGGCTACTCGATGTGCTGCATATCTAAATGGAGCTGCCCACTCAGTATTACCTCACTTGCCATCCTTGACCTTGCCAACAAAAAAGTTTGTCAAGAGAAGGAGGTTGGGTGGATACCAAAGGAAGCATACTAACTATGGGACTCATTTTAGACAATCTTTACTTAGATGCTATCTCAACTTCAAAAGAAGTGGGAGGCCAGAACGTTTGATGTTCCATCAGAATGGTGAGTGGATAGATTTCCCTCAGGATGTTATTGACTTAGTTAGGAAAGATCTGGAGGCAAAGAGGGCAGCTGTGGAAGTGAAGTTCAATGGTCATCATGTTGTACTCGATTTTTTGCACATGTATCAGATGGACTTGAAAACTGGTTCACAGCGTCCTATTGCCTGGATTGATGAGAAAGGATGCTGCTTCTTTCCTGAAGTTTATGCAACTTCTGATGAAGAGTCATATAGTTTTTCCAAAGAAGATGGTAGAAGAGTGGATGGCCATTTGTCTCAGGAGCCTTATGAATCTAATGAGATAAAATTGCATTtggaaattgaaataaatggaTTGGACGAAACCAAGttgagggaatgtagtggtgaatCAAATGCTCTAGTTAAGCATATCCATATTGATGCAAAACGTCCCTGCAATGAAGATGATGTAGAAGTTGAAGATAGTAGTAATAAGCTGGATAATGGAAATTTTGGTAAAGCTATTGAGCAAAACCAAGAGATAGCTTTAGATACTTATACTGAATCTGTAAATGGAAAAGCGGATTTGGAAACTGTACAGAAGATGTTTCTTAAGGGCATGAGTAGTTATGGCACTACTGATATTGTGGAGACATACCACAGCTCAAGTACTTTGATGCAAGCACGGTTGGAGCTATTCCAGAAGCAGGTTGAAATTACAAGTAATATCCGTGCAGATGCTAATGTTCGATATGCTTGGCTTGCTTCTTCTAAAGGAGAACTGTCTGCAATCATGAAGTATGGGCTTGGGCACTGTGGTCTATCTGCAACTAAATCCACATATGGTGTTGGTGTGCATTTATCATCTGCTGACTGCCCTCACCTGAGATTTTCCAGAATGCACTGCGTCCTGGTTGGCAGTGCAATTTCTTGTGATGTTGACGAAAATGGGGTGCGACACATGGTGTTGTGTCGTGTAATATTGGGGAAGATGGAGCTTCTCTGTCCTGGCACTAGACAATTTCATCCCAGTAGTGATGACTTTGATAGTGGGGTAGATGACATTCAAAGTCCACGATACTATGTAGTATGGAATATGAATTTGAATACCCACATCTATCCGGAATTCGTTGTTAGTTTCAAGGTTTCTGCTAATGCTGAAGGTTGTCTTTTTGGAATTGTGAGTAAGCCTAATGTTTCTGGGGTTACTGCAACATATCAAGGCCTTCAAGGCCTATTACATTCTGAGTCTTCTATTGTAGATGTGAAGAGCATTAGCCAATCTATTTTAGATCGTGGGGTACCTCTGGGAAAAGCTGCTAGCGTCACTTCTAGCACTCCAAGAGCTCCAAAATCCCCTTGGATGCCTTTCCCTATGCTTTTTGCTGCTATCTCAAACAAGATTCCTCCCAAGGATATGGAGCTTATCAATATACATTATGAAGAATTCAGGTCAAAGAAGATTGCTcgtgatgattttgtgaagaagTTAAGGTTAATAGTTGGAGATACTCTGTTGAGGACTACAATAACAAACCTTCAATGCAAGATTTCTATATTGGCTAAACTAATTATCTGCTTCTCTCCCTCCTATTTGAGTGGCACGTGGTTGAATGTTCCATTGGCTGTTTTCAGATACCATCCAAATCCTTGTGTGAATCAGGAAGAAGTCAGACAGCAGCATAAAAGGATGAGGCAGCTTTTATATGATGGAGCTGTTTTGCGCAATTTCTACTCTCTACTGGCCTTTTCTAGTTGCTTACCGACTTGGATAATTGGAGATTGCCTAATTCTACGCTCCTTTAATGCTGCTGGCAAGCTTTATCTGTTTCCATTTTTCTTCCATTTTGGATGGAAGCAAGAGACTTTAAAATCTTATGAACCATGA 2130 0.3967 MEAKIEKALDRVVLNLKRKRATRCAAYLNGAAHSVLPHLPSLTLPTKKFVKRRRLGGYQRKHTNYGTHFRQSLLRCYLNFKRSGRPERLMFHQNGEWIDFPQDVIDLVRKDLEAKRAAVEVKFNGHHVVLDFLHMYQMDLKTGSQRPIAWIDEKGCCFFPEVYATSDEESYSFSKEDGRRVDGHLSQEPYESNEIKLHLEIEINGLDETKLRECSGESNALVKHIHIDAKRPCNEDDVEVEDSSNKLDNGNFGKAIEQNQEIALDTYTESVNGKADLETVQKMFLKGMSSYGTTDIVETYHSSSTLMQARLELFQKQVEITSNIRADANVRYAWLASSKGELSAIMKYGLGHCGLSATKSTYGVGVHLSSADCPHLRFSRMHCVLVGSAISCDVDENGVRHMVLCRVILGKMELLCPGTRQFHPSSDDFDSGVDDIQSPRYYVVWNMNLNTHIYPEFVVSFKVSANAEGCLFGIVSKPNVSGVTATYQGLQGLLHSESSIVDVKSISQSILDRGVPLGKAASVTSSTPRAPKSPWMPFPMLFAAISNKIPPKDMELINIHYEEFRSKKIARDDFVKKLRLIVGDTLLRTTITNLQCKISILAKLIICFSPSYLSGTWLNVPLAVFRYHPNPCVNQEEVRQQHKRMRQLLYDGAVLRNFYSLLAFSSCLPTWIIGDCLILRSFNAAGKLYLFPFFFHFGWKQETLKSYEP 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4158 709 ProSiteProfiles PARP catalytic domain profile. 254 482 IPR012317 GO:0003950
Sto6g4158 709 SUPERFAMILY ADP-ribosylation 277 463 - -
Sto6g4158 709 ProSiteProfiles RST domain profile. 529 600 IPR022003 -
Sto6g4158 709 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 598 IPR044964 -
Sto6g4158 709 Gene3D - 266 466 - -
Sto6g4158 709 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 598 - -
Sto6g4158 709 Pfam WWE domain 93 148 IPR004170 -
Sto6g4158 709 Pfam RCD1-SRO-TAF4 (RST) plant domain 530 595 IPR022003 -
Sto6g4158 709 ProSiteProfiles WWE domain profile. 75 150 IPR004170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4158 Sto-Chr6 44922807 44927573 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4158 - - aprc:113869887 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4158 6 44922807 44927573 Sto6g4158 6 44922807 44927573 ECH