Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4157 ATGGAATCAAAGATCGCAAAGGCGTTGGATAGGGCTGTGCTCAATTTGAAACGAAAACGGGCTACTCGAAATGCTGCATATATAAATGAAGCTTCCCAGTCAATGTTACCTCACTGGCCATCCTTGACTTTGCCAACAAAAAAGTTTGTCAAGAGAAGGAGGTTGGGTGGATACAAAAGCAAGCATACTTACTATGGGACACATTTTAGACAATCTTTACTTAGATGCTATTTCAACTTCAAGAAAAGTGGGAGGCCAGAACGATTGATGTTCTATCAAGATGGTGAATGGATAGACTTCCCTCAGGATGTTGTCAACTTGGCTAGGATAGATATGGATGCAAAGAAGGCAGCTGTGGAAGTGGAGTTCAATGGCCATCGTTTTGTACTAGATTTTTTGCACATGTATCAGATGGACTTGAAAACTGGTTCACATCAACCTATAGCTTGGATTGATGAGAAAGGGTGCTGCTTCTTTCCTGAAGTTTATGCTGCTTCTGATGAAGAGCCATATATTTATTCCAAGGAAGATGGTGGAAAAGTAGATGACCAATTGTGTCAGGAGCCTTATGAATCTAATGAGATAAAATTGCATTtggaaattgaaataaatggaGCTGACGTATCCAAGTTGAgtgaatgtagtggtgagtcaaatgctCTAGTTAAGCATATCCAGATTGATGCAAAACATACCTGCAATGAAGATGATGTAGAAATTGAGGATAGCAGTAATAAAGTGGATAATGGAAATTTTGGTAAAGCTATTGAGCTAAATCAAGGGATAGATTTAGATACTTATACTGAAACTGTAGAAGGAAAAATGGATTTGGAAACTGTACAGAAGATTTTTCTTAAGGGCATGAGTAGTTATGGCACTACTGATATTGTGGAGATATACCGCTGCTCAAGTACTTTGATGCAAGCACGATTGGAGCTATTCCAGAAGCAGGTTGAAATTACAAGCAAGTACCGTGAGAATGCTAATGTTCGATATGCTTGGTATGCTGCTTCTAAGGGAGAACTGTCTTCAATCATGAAGTATGGGCTTGGGCACTGTGGTCTATCTGCAACCCAATCCTCATATGGCATGGGTGTTCACCTAGCAGCTGCGGGCTGCCCTAACACAAGTGCAATTCATTGTGATGTTGACGAAAATGGGGTACAACACATGGTGTTGTGTCGTGTAATAATGGGGAACATGGAGCTTCTCCGTCCTGGCGCCGGACAATCTCATCCCAGTAGTAATGACTATGATAGTGGTGTAGATGACATTCAAAGTCCAAGATACTATGTAATATGGAATATGAATTTGAATACCCATGTCTATCCAGAATTTGTTGTTAGTTTCAAGGTTTCTGCTGATGCTGAAGGGCATCTTTTTGGAAGTGTTAGTAAGCTTAATGTCTCTGGCGTTACTACAGCTTGTCAAGACCCTCGAGGCCTATTACAATCCGAGTCTTCTACTGTAGATATGAAGAGCGTTAGCCAACCAATTTTAGGCCCTGGGGTACCTCAAGGGAAAGCTGTTTGTATGACTTCCAGCACTCCAAGAGCCCCAAAATCCCCATGGATTCCTTTCCCTAAGCTTTTTGCTGCTATCTCAAACAAGGTTTCTCCCAAGGACATGGAGCTTATCAATATACACTATGAACTATTCAGGTCAAAGAAGATAGCCCGTGATGAATTTGTGAAGAAGTTGAGGTTGATAGTTGGAGATGCTCTGTTGAGGACTACAATAACAAACCTTCAGTGCAAGATACCATCCAAATCACTGTGTGAATCGGGGACAAGTCAAACAGCTACAGAAAAGGATGAGGCTGCGTTTATATTAGGGAGTTTTTGTGGAATAATAAGTGGGGATCCGAAAATTTATGCTGCGGTTAACATGTCTTTTATTAGTTCTGGCCTCTGGGCATCTGGCAATTGTATCATTGGAGGTTTTGTGCAAAACGGGAATCATAATGGTCTTCTCATGGaatCACCAGAAATGGTTGTTCTAATGGTAGACATTGCCCTCTCAGCAGCTCCCATTGCCACAGAATAA 2046 0.4037 MESKIAKALDRAVLNLKRKRATRNAAYINEASQSMLPHWPSLTLPTKKFVKRRRLGGYKSKHTYYGTHFRQSLLRCYFNFKKSGRPERLMFYQDGEWIDFPQDVVNLARIDMDAKKAAVEVEFNGHRFVLDFLHMYQMDLKTGSHQPIAWIDEKGCCFFPEVYAASDEEPYIYSKEDGGKVDDQLCQEPYESNEIKLHLEIEINGADVSKLSECSGESNALVKHIQIDAKHTCNEDDVEIEDSSNKVDNGNFGKAIELNQGIDLDTYTETVEGKMDLETVQKIFLKGMSSYGTTDIVEIYRCSSTLMQARLELFQKQVEITSKYRENANVRYAWYAASKGELSSIMKYGLGHCGLSATQSSYGMGVHLAAAGCPNTSAIHCDVDENGVQHMVLCRVIMGNMELLRPGAGQSHPSSNDYDSGVDDIQSPRYYVIWNMNLNTHVYPEFVVSFKVSADAEGHLFGSVSKLNVSGVTTACQDPRGLLQSESSTVDMKSVSQPILGPGVPQGKAVCMTSSTPRAPKSPWIPFPKLFAAISNKVSPKDMELINIHYELFRSKKIARDEFVKKLRLIVGDALLRTTITNLQCKIPSKSLCESGTSQTATEKDEAAFILGSFCGIISGDPKIYAAVNMSFISSGLWASGNCIIGGFVQNGNHNGLLMESPEMVVLMVDIALSAAPIATE 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4157 681 Pfam RCD1-SRO-TAF4 (RST) plant domain 519 584 IPR022003 -
Sto6g4157 681 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 587 - -
Sto6g4157 681 SUPERFAMILY ADP-ribosylation 278 451 - -
Sto6g4157 681 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 587 IPR044964 -
Sto6g4157 681 ProSiteProfiles RST domain profile. 518 589 IPR022003 -
Sto6g4157 681 Gene3D - 267 455 - -
Sto6g4157 681 ProSiteProfiles PARP catalytic domain profile. 255 471 IPR012317 GO:0003950
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4157 Sto-Chr6 44910558 44918338 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4157 - - aprc:113869887 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4157 6 44910558 44918338 Sto6g4157 6 44910558 44918338 ECH