Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4155 ATGGGGAAGGAAGGTGATCTCTGGGACGATTCAGCTCTCATCAATGCCTTCAATCAGGCCATCTCTACTTACAAGATAATCCATAGCAGTAAAAACAAAGATAACTCAAGTGAGATGGAGAAAGTGACTGGCAGCACTGAAGAAATTGACTCTAAAAGCGACTCTGAAAATCTTGAGACTACAAGAGATGCTGAAGAGAAAAGCAGCCTTATTGCTCCTGATTTAGCAGAGACTAGTAATTCATCATACTTGGAAGAAAATAATCATGAAAATTCACAAGCAACCCAACCTTGTCTAGATTCATCAAGTGGTCAAAACATTGAACATTCACAAGAGGCACATAACAGTTATCCACATACACAAGATGTTGATGATTATAATCGCCTAGTTGGCCAATACTATGAACTTGAGGAGCAGAGGCAGAAGATTTTAGAGCAACTTAATCAATATGGAGGATGGAATTACCAATATACTGCTGCTGCTTCTAATTCTGGCGTACAATATTCAAATTCCCAGGCTTATCCAATGTCTTCTTGCCATGTTTCGGATTCTTATGTGCACTGTCTGTGTTGCGATTGTTGTAGTCAATGTTTGTTGCTTCCATGCACATTGGTACCTAGTTGTACTTCGGGTGGAACATGTGTTGGTAAACCTGTGGATGATTGTTCTGTGGCAATATGTCCTGAAAAGTCATTTCCTCATGAAGATGATAAAATCCTCAAAACAGCTATAAGAGCTGCTGAGAGAGCAATGTCCACTGTCAAAACAACAATTTCTGGTGATTCTGACAAAAAAGAAGATGAAGATAGAAACCAGTCTGAACTGGATCGACCTAATGGTTCAGATCCGGATCTTACTATCGTTTTGAATGCATGGTATTCTGCTGGCTTCCACACTGGAAAGAAGTTTGTGATGACCTATGAGAATGTACCCAAACATTATCGGATAAGTGAAGCTCCGGAGTATTGTGGTGCGAGGTGTTTGTGGTTCATGAAGAGAGCTAATCCAACATTCCGTGGCTTGAATGCATGGTCTTCACTCGCAATCGAATATTTAGGGAGCATGATGGCCTATGAAAATGTACCCAAGCATCATCGGACAATCAAAGTTCTCTTAAATGCAGTGCAGATTACGAGTCCTATGCCTTCAACTATGAGTATGTTTACTCCTCTCTCTGCGGCACGCGCCAACTCTCTCTGCCCCTCAAATAATACTATGCTTATCCTTTCTTCTTCAGCTCCTTCTCCATCGCCCACATTCTTCCCTCCAAGCTCTCCTAGGGTTTTTTCATCatcattctcttcttcttcctcctcttctttttctcctAAGCTTTCTTCGATTCCTTTCCGATCCACTGCCCGGATTGCTTGTTCCTGTTCCCTTAACTCCTTGAAGATCAGAGCCAAGGAGGACGTGTTTCCTACCAACGACTCTCCGGATAACATGGCTACTTCGCTTTCTCCGCGAACGTTTCTCAATGCTCGCACCGAAGAAGAACTTCTGTTGGCAATCAGGAAGGAAGCAGAAGCAGGATCTCTGCCTTCTAATGTTGCTTCGGGGATGGAGGAATTATACCAGAACTATAAAAGTGCAATTATAAAAGGTGGACATCCCAGGGCAGATGAGCTTATATTGTCAAATATGACTATTGCATTGGATCGCATATATTTGGATGTGGAGGATCCTTTTATCTTTGAACCACACCACAAGGCAAAGCGTGATCCATTTGACTACTACATGTTTGGTCAAAATTATATACGTCCTTTAATTGATTTCAGGCTACTTACTAATGTCAAAGCAATTGTGATGTTCCCAAGCTCCTTCCCTGGAAATTCTTATGTTGGTAACATTTCCTTGTTCTACGAAATGGAAGAGAAACTTAAGCAGAGAGAGAAGGGGAGGGGCGGGGGTATAGGAAGTCCCAAGTTTCCTCTTTTGTTGCGTCTACCTTGTGCAAAATTTAAGGCTGATGTCTATGCATGTGTGTACAGTAAACTTCCTGGACACAATATCATCTTAGTATCAAATCACCAGACCGAAGCAGATCCAGCTGTTATTGCTCTTCTTCTTGAGACAGCATGCCCGTATATTGCTGAAAACATGACTTATGTTGCAGGAGATAGAGTTGTAACAGATCCCTTGTGCAAACCCTTTAGCATGGGCAGGAATCTTATTTGTGTTTACTCTAAAAAACACATGTTTGATGTTCCGGAACTTGTAGAGATGAAAAGAAAAGCAAATACACGAAGTTTGAAGGAAATGGCTGTGCTTTTGAGGGGTGGGTCACAGATAGTGTGGTTTGCACCAAGTGGTGGTAGGGATCGATCAGATCCCCAGACAGGAGAGTTTCTACCGGCTACACTGTGTAGAGGAGAAGTTGGAAGTAAACAGAAAGAGAACTGTAAGGATTGTGGTCAGCCTACTTCTCTAATTCTGTTTGCGCATTTAAGTTTGAACTGTAGGAGGGATCAGCTCTTACTATTAGATGAATTGCATTTCTTTGTTTGTGAATCAGGCATTCAGGCACCATTTGACGCTTCTTCAGTAGACAATATGAGAAGGCTTGCTGAATATTCTAATCCACCAGGTCATATATATCCTTTGGCAATATTGTGCCATGATATAATGCCCCCACCTCAAGAGGTCGAAAAAGAAATTGGAGAGAAAAGAATTATATCCTTTCATGGAGTTGGAGTATCAGTGGCTCCAGAGATAAGCTTTTCTAAAACCACTGTTTCTTGTGAAAGCCCTGAAAAGGCTAAGGAGGTATATAGTCAAGAATTTTATAATTCTGTGACTCAGCAATATAATGTGCTGAAATCTGCCATACATGGCCAAAAAGGATTGGAAGCGTCAACCCCGAATGTGTCTCTGTCACAGCCATGGATTTAG 2895 0.4114 MGKEGDLWDDSALINAFNQAISTYKIIHSSKNKDNSSEMEKVTGSTEEIDSKSDSENLETTRDAEEKSSLIAPDLAETSNSSYLEENNHENSQATQPCLDSSSGQNIEHSQEAHNSYPHTQDVDDYNRLVGQYYELEEQRQKILEQLNQYGGWNYQYTAAASNSGVQYSNSQAYPMSSCHVSDSYVHCLCCDCCSQCLLLPCTLVPSCTSGGTCVGKPVDDCSVAICPEKSFPHEDDKILKTAIRAAERAMSTVKTTISGDSDKKEDEDRNQSELDRPNGSDPDLTIVLNAWYSAGFHTGKKFVMTYENVPKHYRISEAPEYCGARCLWFMKRANPTFRGLNAWSSLAIEYLGSMMAYENVPKHHRTIKVLLNAVQITSPMPSTMSMFTPLSAARANSLCPSNNTMLILSSSAPSPSPTFFPPSSPRVFSSSFSSSSSSSFSPKLSSIPFRSTARIACSCSLNSLKIRAKEDVFPTNDSPDNMATSLSPRTFLNARTEEELLLAIRKEAEAGSLPSNVASGMEELYQNYKSAIIKGGHPRADELILSNMTIALDRIYLDVEDPFIFEPHHKAKRDPFDYYMFGQNYIRPLIDFRLLTNVKAIVMFPSSFPGNSYVGNISLFYEMEEKLKQREKGRGGGIGSPKFPLLLRLPCAKFKADVYACVYSKLPGHNIILVSNHQTEADPAVIALLLETACPYIAENMTYVAGDRVVTDPLCKPFSMGRNLICVYSKKHMFDVPELVEMKRKANTRSLKEMAVLLRGGSQIVWFAPSGGRDRSDPQTGEFLPATLCRGEVGSKQKENCKDCGQPTSLILFAHLSLNCRRDQLLLLDELHFFVCESGIQAPFDASSVDNMRRLAEYSNPPGHIYPLAILCHDIMPPPQEVEKEIGEKRIISFHGVGVSVAPEISFSKTTVSCESPEKAKEVYSQEFYNSVTQQYNVLKSAIHGQKGLEASTPNVSLSQPWI 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4155 964 MobiDBLite consensus disorder prediction 28 123 - -
Sto6g4155 964 Gene3D - 563 634 - -
Sto6g4155 964 Gene3D - 838 955 - -
Sto6g4155 964 Gene3D - 657 821 - -
Sto6g4155 964 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 475 963 - -
Sto6g4155 964 MobiDBLite consensus disorder prediction 73 122 - -
Sto6g4155 964 MobiDBLite consensus disorder prediction 31 70 - -
Sto6g4155 964 Pfam Acyltransferase 668 788 IPR002123 GO:0016746
Sto6g4155 964 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 669 788 - -
Sto6g4155 964 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 843 963 - -
Sto6g4155 964 MobiDBLite consensus disorder prediction 253 282 - -
Sto6g4155 964 MobiDBLite consensus disorder prediction 259 277 - -
Sto6g4155 964 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 490 631 - -
Sto6g4155 964 SMART plsc_2 672 819 IPR002123 GO:0016746
Sto6g4155 964 Pfam Glycerol-3-phosphate acyltransferase N-terminal 490 564 IPR023083 GO:0004366
Sto6g4155 964 Gene3D - 488 562 IPR038114 -
Sto6g4155 964 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 475 963 IPR016222 GO:0004366|GO:0006650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4155 Sto-Chr6 44877789 44891409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4155 490 963 Acyl Lipid Metabolism Gene Families AT1G32200 51.477 7.18e-163 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4155 K00630 - pop:18094119 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4155 6 44877789 44891409 Sto6g4155 6 44877789 44891409 ECH