Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4152 CTGCTTTTCTTTTTCGTCGTCAGCTTCGCCAACGCCACGTTTAACCTCACCACCATACCCTTTAACGCCGGCTATTCACCGCTCTTCGGAGACGCCAACCTCGTTCGCTCCCCCGATGGCAACGGAGTCCGTCTTCTCCTCGATCGCTTCACCGGTTCGGGTTTCATCTCCTCCAATATGTACCAGTACGGATTCTTCAGCGCCAATATTAAATTGCCTTCAGATTACACGGCTGGCGTTTGCGTCGCcttttatACATCGAATGGCAACGTGTTCGAGAAGACACACGACGAATTGGATTTCGAGTTCTTAGGTAATATCGCAGGAAAGCCATGGAGATTTCAAACAAACTTATATGGCAACGGAAGCACTAATCGCGGCCGCGAGGAGAGGTATCGCCTTTGGTTCGACCCAACCAAAGACTTTCACACATACAGCATCCTTTGGACCCCCAACAATATCATATTTTACATTGACGAAATTCCAATAAGGGAGGTAGAGAGAAGTGAGGAAATGGGTGGTGATTACCCATCAAAGCCCATGTCATTATATGCTACCATATGGGATGCTTCCAATTGGGCCACATCTGGTGGCAAATACAAAGTGAACTACAAGTATGCTCCTTTTGTCTCAGAGTTCAAGGACTTGGTCCTTCATGGCTGTTCTGTTGATCCCATCCAAGAAGTCTCCGCCACCGGTGCTTGCTCCGGCATACATGCCGAGCTCCAAGCCCAAGACTATGCCACCATAACCCCCATGCGCCGCCGTGCCATGCGGAGGTTCCGAGAACGTTACATGTACTACTCATACTGCTATGATACGTTGAGGTACCCTGTACCACCACCAGAGTGTGTTATTATACCCTCTGAGAAACAGAGGTTCATGGAAACCGGGAGGTTAAGATTTGGCGGCAGCCATCGGCCACGGCGGCCTAGGCGGGGAGGCCGTACTGCAACTCCGGTGGATGAGAATGAACAGGTTATGTGA 987 0.5005 LLFFFVVSFANATFNLTTIPFNAGYSPLFGDANLVRSPDGNGVRLLLDRFTGSGFISSNMYQYGFFSANIKLPSDYTAGVCVAFYTSNGNVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTNRGREERYRLWFDPTKDFHTYSILWTPNNIIFYIDEIPIREVERSEEMGGDYPSKPMSLYATIWDASNWATSGGKYKVNYKYAPFVSEFKDLVLHGCSVDPIQEVSATGACSGIHAELQAQDYATITPMRRRAMRRFRERYMYYSYCYDTLRYPVPPPECVIIPSEKQRFMETGRLRFGGSHRPRRPRRGGRTATPVDENEQVM 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4152 328 PIRSF EndGlu_transf 1 289 IPR016455 GO:0010411|GO:0016762|GO:0042546
Sto6g4152 328 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9 307 - -
Sto6g4152 328 Pfam Glycosyl hydrolases family 16 34 205 IPR000757 GO:0004553|GO:0005975
Sto6g4152 328 Gene3D - 8 284 - -
Sto6g4152 328 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 12 213 IPR000757 GO:0004553|GO:0005975
Sto6g4152 328 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 286 IPR013320 -
Sto6g4152 328 CDD GH16_XET 17 284 IPR016455 GO:0010411|GO:0016762|GO:0042546
Sto6g4152 328 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 9 307 IPR044791 GO:0004553
Sto6g4152 328 MobiDBLite consensus disorder prediction 300 328 - -
Sto6g4152 328 ProSitePatterns Glycosyl hydrolases family 16 active sites. 98 108 IPR008263 GO:0004553|GO:0005975
Sto6g4152 328 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 245 284 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4152 Sto-Chr6 44864203 44866689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4152 1 306 Glycoside Hydrolase AT1G32170 71.569 1.97e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4152 K08235 - gmx:100786236 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4152 6 44864203 44866689 Sto6g4152 6 44864203 44866689 ECH