Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4145 ATGGATCGACATGGGGGAGAGAGCTGGAGGGAATTGGTGAAGAAGATGCTTCCTCCTGGAGCTTCTCTCCCTGATGAAGCATCTGATCTTGACTACTCCATAGCCATGGAATATGAGGGTCCACCAGTTTCATATGAAGTACCAAGAGTTGAGCCCCTTGATGTGGGGCGTCCAATAATTGAGTCAATTCCTCTACCAGTATCTCGTATTGCTGGTGTAACTAGTTCTCCTAATCAAAGTCCGAGGATTTCAGGAAGTTCAGAATCTGTAGTGTCTGTCTTGCAAAATCCTGATTTTTCTTCTGCTTCACCTTCAGCCTCACCTGGTTCAGTTCATAACCCTCCTAAACAAGTAACAAATGAAGCAAAGAGGGCACCTGTAGTCACTTTTAATACTGTTGATAGATCTCAGAGGAAGGAAGTTGATGTTGTGAAGCCAGTTTATCCAGAATATGTTGGCGTttcaaaggaaagaaagaaaaagaaaataagagttTGTTATAGATGTGGAAAAGGGAAGTGGGAAACTAAGGAATCTTGCCTAGTTTGTGATGCCAAGTATTGCAGCAATTGTGTGCTTAGGGCAATGGGTTCAATGCCTGAAGGACGCAAATGTGTAACATGCATTGGTCAGCCTATTGATGAATCAAAGCGTCTGAAATTAGGTAAACATTCAAGAGTATTATCTCGACTTCTTAGTCCTTTAGAAGTTAAGCAAATTATGAAAGCAGAGAAAGAATGCTCTGCTAATCAGCTTCGGCCAGAGCAACTGGTGGTtaatggattccctctgaagccAGAAGAGATGGGGGAATTACTGGGATGCCCCTTACCTCCACGGAAGCTGAAACCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGAGAAAAACCTGACAGAATCATAAGTTCAAACTTGAATTTCACTGGGAAGCTTAGCTCCGATGCTAGTAATGGAAACACCGAAGTTTACATCAATGGTCGAGAGATTACAAAACTTGAATTGAGGATACTGAGGCTAGCAAATGTGCAGTGTCCACGTGATACAcacttttgggtttatgatgaTGGTCGTTATGAGGAAGAAGGTCAAAATAATATCAGAGGAAACATATGGGAGAAGGCTTCAACAAGATTTGTTTGCACCTTGTTCTCTTTACCTTTTCCCCATGGAAAGCCTCATGGACCTAGAGATGAGATTAGCAATTATACTACAGTTCCCACTTATCTGGAGCAGAAAAAAATTCAGAAGCTGCTTCTTCTTGGAATTCAAGGATCTGGAACTAGCACTGTCTTTAAGCAGGCCAAATTCTTGTATGGGAACAAATTTACTGCAGAAGAGCAGCAGAATGTCAAGCTGATGATTCAGAGTAACATGTACAAATATCTTAGCATTTTGCTTGATGGAAGAGAGCGTTTTGAGGAGGAGGCAATTTCTAGAATGAATGCGCAGAGTTCTCCCGGTCAAACTATGGGACAAGTTAGGAACGGTGAAGCAAGTGAAACTAGTCAATGCATCTATTCCCTCAACCCCAGGCTGAAGCATTTCTCTGATTGGCTCCTGGATATTATAGCTACTGGGGATTTAGATGCATTCTTCCCAGCAGCTACACGTGAGTATGCGCCGTTAGTTGAAGAAGTGTGGAAGGATCCAGCAATACAAGAAACctataaaagaaaagatgagCTTCACTTTCTTCCAGATGTGGCAGAGTACTTCTTAAGCCGGGCTGTTGAGATATCTAGCAACGAATATGAACCTTCCGAGAGAGACATTATATACGCAGAAGGGGTTACTCAGGGAAATGGGTTAGCTTTCATAGAATTCTCGCTTGATGACCGTAGCCCAATGTCTGAAACTTATACAGAAAATCTAGAAGCTCCACCCCCACCTTTGACCAAGTACCAACTTATAAGGGTAAATGCCAAGGGGATGAATGAGGGTTGTAAGTGGGTTGAAATGTTCGAAGATGTTCGAGCAGTGGTCTTCTGCGTCTCCCTAAGTGACTATGACCAGTTGTGGCTTGCCCCAGACAGCAGTGGCAGTGGGACCCTTCTTCAAAACAAGATGACACAAAGCAAGGAGCTATTTGAGACCACAGTCAGGCATCCTTGTTTCAAAGACACTCCCTTTGTATTGATTCTGAACAAGTATGATATCTTTGAGGAAAAGATCAATAGGGTGTCTCTATCTACCTGTGAGTGGTTCAATGATTTCTGCCCTGTGAGTGCTCATCACAATAACCAGTCACTGGCTCATCAAGCTTACTTCTATGTTGCCATGAAATTCAAGGACCTCTATGCCTCCCTCACGGGTCGAAAACTTTTCGTGTGGCAAGGCCAGGCGAGGGATCGAGTGACTGTTGATGAGGCATTCAAGTACATTAGGGAGGTCCTCAAGTGGGATGAAGAAAAGGAGGAGAATTACTATGGTCCACCTGAGGATTCATTTTACAGTACTACAGACATAAGCTCCTCTCCTTATGTCAGACAAGAGTAG 2514 0.4193 MDRHGGESWRELVKKMLPPGASLPDEASDLDYSIAMEYEGPPVSYEVPRVEPLDVGRPIIESIPLPVSRIAGVTSSPNQSPRISGSSESVVSVLQNPDFSSASPSASPGSVHNPPKQVTNEAKRAPVVTFNTVDRSQRKEVDVVKPVYPEYVGVSKERKKKKIRVCYRCGKGKWETKESCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKHSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLVVNGFPLKPEEMGELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSSDASNGNTEVYINGREITKLELRILRLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFVCTLFSLPFPHGKPHGPRDEISNYTTVPTYLEQKKIQKLLLLGIQGSGTSTVFKQAKFLYGNKFTAEEQQNVKLMIQSNMYKYLSILLDGRERFEEEAISRMNAQSSPGQTMGQVRNGEASETSQCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETYKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDIIYAEGVTQGNGLAFIEFSLDDRSPMSETYTENLEAPPPPLTKYQLIRVNAKGMNEGCKWVEMFEDVRAVVFCVSLSDYDQLWLAPDSSGSGTLLQNKMTQSKELFETTVRHPCFKDTPFVLILNKYDIFEEKINRVSLSTCEWFNDFCPVSAHHNNQSLAHQAYFYVAMKFKDLYASLTGRKLFVWQGQARDRVTVDEAFKYIREVLKWDEEKEENYYGPPEDSFYSTTDISSSPYVRQE 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4145 837 MobiDBLite consensus disorder prediction 819 837 - -
Sto6g4145 837 Pfam G-protein alpha subunit 417 803 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 PRINTS Alpha G protein (transducin) signature 422 437 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 PRINTS Alpha G protein (transducin) signature 590 612 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 PRINTS Alpha G protein (transducin) signature 663 691 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 PRINTS Alpha G protein (transducin) signature 716 725 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 ProSiteProfiles G-alpha domain profile. 419 815 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 MobiDBLite consensus disorder prediction 97 121 - -
Sto6g4145 837 SMART galpha_1 409 804 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 MobiDBLite consensus disorder prediction 811 837 - -
Sto6g4145 837 CDD G-alpha 421 807 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 22 833 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto6g4145 837 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 22 833 - -
Sto6g4145 837 MobiDBLite consensus disorder prediction 97 117 - -
Sto6g4145 837 SUPERFAMILY FYVE/PHD zinc finger 136 209 IPR011011 -
Sto6g4145 837 Gene3D - 614 813 IPR027417 -
Sto6g4145 837 MobiDBLite consensus disorder prediction 71 90 - -
Sto6g4145 837 Gene3D - 450 601 IPR011025 GO:0007165
Sto6g4145 837 SUPERFAMILY Transducin (alpha subunit), insertion domain 448 600 IPR011025 GO:0007165
Sto6g4145 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 810 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4145 Sto-Chr6 44822519 44827464 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4145 - - gmx:100794534 1506.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4145 6 44822519 44827464 Sto6g4145 6 44822519 44827464 ECH