Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4144 ATGGCTGCACTGCAATACCTAGAATCGCTGCGCAACGTGCACCCTGAGCTCTCCGATTGGTATAATTCGCTCGCAGATCTGTACCAGAAGAAGCTCTGGCACCAGCTCACACTGAAGCTCGAGCAGTTCGTAGCTCTTGCTGTTTTCCAGGCTGGCGATGCTCTGATACAGTTATATCACAATTTCATAACAGACTTTGAGACAAAAATCAATCTTCTCAAGCTTGCACATTTTGCTGTGATAGTTTCTCGGCAGTATTCTGAAAAAGAGGCTGCCATTGGCTATCTTGATGGAGTCATTGAAAAGCTTCAAGCCACTAAAGAGCAGCGCATAGAAGAACCTATTCTTTACATTAAGTTGCAGATAGCCTTATTTAAGCTCGAGCAAGGTGACCAAAAGGAATGCAAGAAACTTCTAGATGATGGAAAGAGTACACTTGACAGCATGACAGATATTGATCCATCTGTATATGCTAGCTATTACTGGGTGTCCTCTCAGTATTATAAGTTTCGCCAGGAATTTGCTGAGTTCTACAAAAGTGCTCTTCTCTATCTGGCATATACATCAGTAGAGTCTCTCTCAGATTCATTCAAGCTGCAAATGGCTTTTTTCAGGGGTGATTCCTTTTTGGATTTAAAGAAAGGATTGGATTTGGCATTTGATTTATCCCTTTCTGCTCTTCTGGGAGATAACATCTACAACTTTGGAGAACTTCTTGCCCATCCTATTaTAAAAAGTCTTTTGGGAACGAAGGTGGAATGGCTCTACTATATTCTTCAAGCATTCAATTCTGGCGATTTAGCTGGCTATCAAGAATTATGCGGGGTGCATAATGCTGCTTTAAGGGCTCAGCCAGCACTAGTGCAGAATGAGCAAAGGTTGTTGGAAAAGATCAACATTCTCTGCTTGATGGAGATTATTTTCAGTCGGCCTTCTGAGGACCGAACTATTCCGTTGAGTGTTATTGCGGAGCGTACAAAACTTTCTGTTGAGGATGTGGAGCATCTCCTCATGAAGAGCCTTTCTGTTCATCTGATTGAGGGTATAATTGATCAAGTGGAGGGCACCGTTCATGTTACCTGGGTGCAGCCAAGAGTTCTTGGAATACCACAGATCAAATCCTTACGGGACCGACTGGACAGTTGGGTTGGGAAAGTACACACTGCATTGTTATCCATCGAGGCAGAAACACCTGATCTGATTGGGTcataa 1212 0.4299 MAALQYLESLRNVHPELSDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYSEKEAAIGYLDGVIEKLQATKEQRIEEPILYIKLQIALFKLEQGDQKECKKLLDDGKSTLDSMTDIDPSVYASYYWVSSQYYKFRQEFAEFYKSALLYLAYTSVESLSDSFKLQMAFFRGDSFLDLKKGLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLAGYQELCGVHNAALRAQPALVQNEQRLLEKINILCLMEIIFSRPSEDRTIPLSVIAERTKLSVEDVEHLLMKSLSVHLIEGIIDQVEGTVHVTWVQPRVLGIPQIKSLRDRLDSWVGKVHTALLSIEAETPDLIGS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4144 403 Pfam PCI domain 255 360 IPR000717 -
Sto6g4144 403 SMART PINT_4 289 382 IPR000717 -
Sto6g4144 403 ProSiteProfiles PCI domain profile. 192 364 IPR000717 -
Sto6g4144 403 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B-LIKE 1 203 - -
Sto6g4144 403 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B-LIKE 216 401 - -
Sto6g4144 403 SUPERFAMILY "Winged helix" DNA-binding domain 291 365 IPR036390 -
Sto6g4144 403 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 289 382 - -
Sto6g4144 403 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 216 401 IPR035298 -
Sto6g4144 403 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 203 IPR035298 -
Sto6g4144 403 Gene3D - 240 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4144 Sto-Chr6 44815906 44820403 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4144 K03039 - gmx:100804455 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4144 6 44815906 44820403 Sto6g4144 6 44815906 44820403 ECH