Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4139 ATGCGCCACCACGATCCCAATCCATTCGAAGAAGAAGAGGTCAACCCCTTCTCGAATGGTGCTGGTGCTCCTGGATCAAAATTGCGTGTTCCACCAGTGGCATCTGAACCACTGGGCTTTGGTCAAAGGCATGATGCTACAGTGGATATTCCATTAGAAAATACAAATAATTCTAAGAAAAAAGAGCAAGAGCTTGCGAATTGGGAAGCAGAtctgaaaaagagagagaggGAAATCAAACGAAGAGAAGATGCAGTTGCCAATGCTGGGGTTCCAGTTGACGATAAGAACTGGCCTCCATTTTTCCCTATTATTCACCATGATATAGCCAATGAGATACCTGTTCATGCGCAGAGGCTGCAATATTTGGCATTTGCAAGTTGGTTAGGAATTGTTCTCTGTCTGGTTTTTAATGTAGTTGCTGTGATTGTCTGTTGGATAAGAGGCGGGGgtgttaaaatttttttccttgCTGTGATTTATGCTCTACTTGGAGTCCCTCTTTCATATGTGCTTTGGTACAGGCCTCTATATCGTGCTATGAGGACGGACAGTGCCCTGAAGTTTAGTTGGTTTTTTCTGTTCTACTTGCTTCATATTGCTTTTTGTATCTTTGCTGCTATTGCGCCTCCAATTGTCTTCCATGGAAAGTCATTAACGGGCATTCTTGCAGCAATTGATGTCTTCTCAGATCATGTGTTGGTTGGGATATTCTATTTGGTTGGATTTGGCTTGTTTTGCTTGGAGTCTCTTTTAAGCTTGTGGGTGCTACAGAAAATTTACTTGTATTTCAGGGGGCACAAGTGA 807 0.4102 MRHHDPNPFEEEEVNPFSNGAGAPGSKLRVPPVASEPLGFGQRHDATVDIPLENTNNSKKKEQELANWEADLKKREREIKRREDAVANAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFSWFFLFYLLHIAFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGLFCLESLLSLWVLQKIYLYFRGHK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4139 268 Pfam SCAMP family 96 266 IPR007273 GO:0015031|GO:0016021
Sto6g4139 268 Coils Coil 58 85 - -
Sto6g4139 268 MobiDBLite consensus disorder prediction 1 63 - -
Sto6g4139 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 2 268 IPR007273 GO:0015031|GO:0016021
Sto6g4139 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 2 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4139 Sto-Chr6 44780293 44784812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4139 2 268 Miscellaneous Gene Families AT1G32050 76.208 1.24e-153 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4139 K19995 - gmx:100806586 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4139 6 44780293 44784812 Sto6g4139 6 44780293 44784812 ECH