Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4101 ATGCCCCAGGAGCAGCCGGGGCCCTTGAGAAGGAGTTTGTCAAGAAGGCGCTCCTTAAGGTCTGAGTTAGATACAGATGACAGAGGGTGGACGCCACTCCATGTTTGCGCTCGAAAAGGGGATCTCAAAGTCGTTAAAAAACTTCTTGATGAAGGAATGGATGTAAATGTGATTGCATGGGGCCCAAAGTCAAAAGGGGTGACCCCTCTACACCTTGCTGCTGAAGGTGGCCACCTTGAAGTGATGGATGTGTTGCTTGAGCGTGGTGCTGACATCGATGCCCGGACTAAGGGAGCTTGTGGCTGGACACCACTCCACATTGCAGCTAAAGAAAGGAGGCGGGCAGCCATGAAATATTTGATAGAGAATGGAGCATTTTTGCCGCCTGATATTAGTGACTGTAGATTTAATCCGCCTCTTCATTATTGCCCTGGACTTGAATGGGCCTATGAGGAGATGAAGCGGCTACGACATGAGAATTCGTCATCCGGGGATACTTCTTGCAGCTCAGAAAGCTAA 519 0.4971 MPQEQPGPLRRSLSRRRSLRSELDTDDRGWTPLHVCARKGDLKVVKKLLDEGMDVNVIAWGPKSKGVTPLHLAAEGGHLEVMDVLLERGADIDARTKGACGWTPLHIAAKERRRAAMKYLIENGAFLPPDISDCRFNPPLHYCPGLEWAYEEMKRLRHENSSSGDTSCSSES 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4101 172 PRINTS Ankyrin repeat signature 29 44 IPR002110 GO:0005515
Sto6g4101 172 PRINTS Ankyrin repeat signature 81 95 IPR002110 GO:0005515
Sto6g4101 172 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Sto6g4101 172 Pfam Ankyrin repeat 100 125 IPR002110 GO:0005515
Sto6g4101 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Sto6g4101 172 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 5 171 - -
Sto6g4101 172 Pfam Ankyrin repeats (3 copies) 24 95 IPR002110 GO:0005515
Sto6g4101 172 Gene3D - 17 168 IPR036770 -
Sto6g4101 172 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Sto6g4101 172 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Sto6g4101 172 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 5 171 - -
Sto6g4101 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Sto6g4101 172 SMART ANK_2a 100 133 IPR002110 GO:0005515
Sto6g4101 172 SMART ANK_2a 28 57 IPR002110 GO:0005515
Sto6g4101 172 MobiDBLite consensus disorder prediction 1 21 - -
Sto6g4101 172 SUPERFAMILY Ankyrin repeat 25 143 IPR036770 -
Sto6g4101 172 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Sto6g4101 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4101 7 155 Acyl Lipid Metabolism Gene Families AT5G53470 32.215 8.97e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4101 - - gmx:100818162 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4101 6 44560955 44562883 Sto6g4101 6 44560955 44562883 ECH