Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4098 ATGGATGCTATAAGGAAACAAGCTAGCAAATTAAGGGAACAAGTTGCCAAGCAGCAGCAGGCTATACTCAGACAACTAGGCCAAATTACCAATGAACCGCTTATGACGGATGAATCTGAACTTCAATGTCACCAACAACTTCGGAAGTTATACAATTCAACAAAGGCAGCCAAGCATTTTCAGCGGCATATTGTTCGGGGTATTGAAGGTTTGGTCTCTGTTAGTTCAAAGCAGATGGAGATAGTAAGGAAGTTGGCTAAAGAATGTTGTAAGTATGGGACAGAGAATCAAGCCAGTAGTTATCCACTTGCAATAGCTTCCCTTCACATGGGTAACTCATATGATTTAATGGAAAATGAAAGGGAGACTTTGCTTGGGATCTGCAATCATCAGGTCTCTGAGCCACTACGGGCACAAATAACAGGAGCCCCTTTAGAGGATGCACGCCACCTCACTTACCGCTACGACAAACTTTTTCAAGAGGTGGAAGCCCAGGCTGCTGAAGTTTTGAGGCGTCGTTCAAAGTTGAGGGATTCTTCTATTTCTGCAGAGAGCTCTATGAAGCTTCAAAATGCAGAAACAAGGTTGAAAGAGCTTAAATCTGCCTTGGTGGCACTTGGGAGAGAAGCAACGGCTGCTATGTTATCAGTTGAAGATGAACAGCAACAAATAACTCACAAGAGTCTTTGTACTATGGTAGACGCTGAGAGAGCTTATCATCAGCATGCCCTTGTTATTTTAGAGAAGCTATATGCTGAGATGATTCTGGAGAAACAAACAAAAGAGTCTTCAACAGCTCCAGTGCCAAGAGATGGATATAGTCAAGCTGTAGTTGAGAATGCTAATCTAAATGGTGATCAGCAAAGCACTGGTCCAACAGTTACCTACTATTTTGCtaagGTCGTACACCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGTTTATCAGTTGATGATTACGTTGTGGTTCGGCAGGTGGCTCCCAATGGATGGTCTGAAGGAGAATGCAGAGGCAGTGCAGGATGGTTTCCCTCTGCATATGTAGAGAAACAGGACAAAATACCAGCTAGCATGCTTATGGAAGCAACCACGACTTCTTGA 1101 0.4351 MDAIRKQASKLREQVAKQQQAILRQLGQITNEPLMTDESELQCHQQLRKLYNSTKAAKHFQRHIVRGIEGLVSVSSKQMEIVRKLAKECCKYGTENQASSYPLAIASLHMGNSYDLMENERETLLGICNHQVSEPLRAQITGAPLEDARHLTYRYDKLFQEVEAQAAEVLRRRSKLRDSSISAESSMKLQNAETRLKELKSALVALGREATAAMLSVEDEQQQITHKSLCTMVDAERAYHQHALVILEKLYAEMILEKQTKESSTAPVPRDGYSQAVVENANLNGDQQSTGPTVTYYFAKVVHPFDAQAEGELSLSVDDYVVVRQVAPNGWSEGECRGSAGWFPSAYVEKQDKIPASMLMEATTTS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4098 366 ProSiteProfiles Src homology 3 (SH3) domain profile. 294 353 IPR001452 GO:0005515
Sto6g4098 366 SUPERFAMILY SH3-domain 294 357 IPR036028 GO:0005515
Sto6g4098 366 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 361 - -
Sto6g4098 366 Gene3D Arfaptin homology (AH) domain/BAR domain 41 259 IPR027267 -
Sto6g4098 366 Coils Coil 1 21 - -
Sto6g4098 366 SMART SH3_2 297 352 IPR001452 GO:0005515
Sto6g4098 366 Pfam Variant SH3 domain 301 349 IPR001452 GO:0005515
Sto6g4098 366 Coils Coil 182 209 - -
Sto6g4098 366 PANTHER SH3 DOMAIN-CONTAINING 1 361 - -
Sto6g4098 366 Coils Coil 159 179 - -
Sto6g4098 366 Gene3D SH3 Domains 281 364 - -
Sto6g4098 366 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4098 Sto-Chr6 44534020 44539386 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4098 - - gmx:100816554 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4098 6 44534020 44539386 Sto6g4098 6 44534020 44539386 ECH