Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4088 ATGTTGACGATGAGGCGAAGACTAGCTTGCTGCACCAGAGAAAGGAAAATTAGCATTGATATTGACGAACAAGAAAGGATTATGACATATAATGGCCTTGAGAGTTGCATTCTCAATAATCAATCTTATGAAGATGAAAGCAGAACTAGTAGAGGAGATGGATGTATAACTGATTCAATTGACGATGATGATTCCACCTGTTCATCAAGTAAAGATAATTTTGGATCGTTCTCTTCAAAATGTTTGACAATGAAAAGGGATGAACAAGGATTGGATGAATGGGAGCTCTCTGAAAGTCCTCAGCATTTTTATGTCAAGGAGAAGCGTTCTTATACTGTCCAATATTCAGATGTAGAAGCCATGAAAGAAAAGTTTGCAAAGCTGTTGTTAGGCGAAGATGTTACAGGAGGAACTAAGGGCCTCAGTACATCCATAGCACTGTCAAATGCCATCAATAACCTAGCAGCAACTATTTTTGGTGAGCTGTGGAAACTAGAACCCCTTTctgaagaaaggaaaagaaattggCGAAGAGAAATGGACTGGTTGCTGTCTCCTACCAACTATATGGTCGAGTTAGTTCCTGCTAAGCAAAATGGTGCCAATGGTGGGATCTTTGAGataATGACCCCAAAGGCTCGGGCTGACATCCACATGAATCTTCCAGCACTTCAGAAGTTGGACTCCATGCTCATTGAGACTCTAGATTCAATGGTGAATACAGAGTTTTGGTATGCAGAGGGAGGAAGCCGAGTGGAAGGAAGAAACACAAGTGCAAAACAAAGCAAGAGATGGTGGTTACCATCACCTCAAGTGCCAAAAAGTGGGCTTTCTGACACTGAAAGAAAGAAGCTGCTTAATAAAGGAAGGGTTGTGTATCAAGTATACAAGGCTGCTAAATCTATCAATGAAAATGTGTTGCTTGAAATGCCAGTGCCAACAATCATTAAGGATGCACTTCTAAAGTCTGGAAAGGCAAGCCTTGGAGACGAGCTGTACAAGGTTTTGGCATCTGAATCAAGCTCTGGAGAAGAGATGCTTAAATCTCTCCAATTGAAATCTGAACATAGTGCCCTTGAGACCATTAACAAATTGGAAGCTGCTATTTTTTCCTGGAAAGAGAGAATTGCGGAACAAGCTAGTGGCAAATCTCCTCTTCGGACCTCTTGGTCTTTTACAAAGGACCCTATGTCAGAGATGGATAAGATGGAGTTACTGTCGGATCGTGCAGAAACACTTGTTCAGCTGCTTAAAAACAGATACCCAAACCTTCCTCAAACATTTCTTGATGCCACCAAAATTCAATATGGCAAGGATATTGGACATTCCATTTTGGAAGCCTATTCCAGGGTTCTTGGAAACTTAGCCTTCAGCATACTGTCTAGAATTGGAGACATATTGCAGGAAGATGCTTTAAGCAATCCCAATTCCCCAGTGGCAACAAGTTGGTCTCCTGCCCCAAATCTCTCTGAAACTTGGGTGGTTGGTTCACACATCAGGCACTCACTGATTGATAAGATGAACAAGGCTGATGGACCGTACTGTGAGTCTAGTTGTGGTAGTACGTCCGATTTAGAACTTTCATGTACAGACGCTAAACCAAATTCTGTAACTCAAACACCAAGTCGGAGTCGAGTCTGGTGCATTGGTAGAGAGGCTTGTACAAGTGTCTCCCCTCAAAATTCCCCATAG 1692 0.4161 MLTMRRRLACCTRERKISIDIDEQERIMTYNGLESCILNNQSYEDESRTSRGDGCITDSIDDDDSTCSSSKDNFGSFSSKCLTMKRDEQGLDEWELSESPQHFYVKEKRSYTVQYSDVEAMKEKFAKLLLGEDVTGGTKGLSTSIALSNAINNLAATIFGELWKLEPLSEERKRNWRREMDWLLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIHMNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRVEGRNTSAKQSKRWWLPSPQVPKSGLSDTERKKLLNKGRVVYQVYKAAKSINENVLLEMPVPTIIKDALLKSGKASLGDELYKVLASESSSGEEMLKSLQLKSEHSALETINKLEAAIFSWKERIAEQASGKSPLRTSWSFTKDPMSEMDKMELLSDRAETLVQLLKNRYPNLPQTFLDATKIQYGKDIGHSILEAYSRVLGNLAFSILSRIGDILQEDALSNPNSPVATSWSPAPNLSETWVVGSHIRHSLIDKMNKADGPYCESSCGSTSDLELSCTDAKPNSVTQTPSRSRVWCIGREACTSVSPQNSP 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4088 563 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 554 IPR038937 GO:0005085
Sto6g4088 563 Gene3D PRONE domain, subdomain 2 311 436 - -
Sto6g4088 563 Gene3D PRONE domain, subdomain 1 122 471 - -
Sto6g4088 563 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 116 474 IPR005512 GO:0005085
Sto6g4088 563 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 20 554 - -
Sto6g4088 563 Coils Coil 400 420 - -
Sto6g4088 563 ProSiteProfiles PRONE domain profile. 108 480 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4088 Sto-Chr6 44461605 44466910 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4088 - - gmx:100818685 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4088 6 44461605 44466910 Sto6g4088 6 44461605 44466910 ECH