Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4078 ATGGGCTCCCAGGGCGGGTTCGGCCAATCCAAGGAGTTCCTCGATCTGGTCAAGTCCATTGGTGAAGCTCGATCCAAGGCTGAGGAAGACAGAATCGTCCTCCATGAGATCGAAACTCTCAAGCGTCGCATCATTGAGCCGGACATTCCCAAGCGCAAGATGAAGGAATTCATCATTCGCCTTGTTTATGTGGAGATGCTTGGCCACGATGCTTCTTTTGGCTACATCCACGCTGTTAAGATGACCCACGACGATAATCTCCTCCTTAAACGAACTGGGTATTTGGCTGTGACCCTTTTTTTGAATGAAGACCACGATTTGATCATCCTTATCGTTAATACCATTCAGAAGGACCTCAAGTCCGATAACTATTTGGTCGTCTGTGCTGCCCTCAATGCTGTTTGCAAGTTGATCAATGAAGAAACTATCCCGGCTGTACTGCCTCAGGTGATTGAGCTTTTGGGTCATTCCAAGGAGGCCGTTCGAAAGAAGGCTATCATGGCCCTTCATCGCTTCTATCAGAAATCGCCTTCCTCAGTGTCACATTTGATCTCCAATTTCCGCAAGAGATTGTGTGATAATGATCCTGGTGTAATGGGTGCCACCTTATGCCCACTTTTTGATCTTATAACGATTGACGCTAATTCTTACAAGGATCTCGTCATCAGCTTTGTGAGCATTCTTAAACAAGTAGCAGAACGCAGATTGCCAAAGAGCTATGATTATCATCAGATGCCTGCTCCATTCATTCAGATTAAGTTGCTGAAAATCTTGGCATTGTTGGGAAGTGGTGACAAGCAAGCAAGTGAAAGCATGTATACTGTTATTGGTGATATAATCAGGAAGGGTGATTCATCAAGTAATATAGGGAATGCTATTCTCTATGAGTGCATATGCTGTGCTTCTTCCATACATCCAAATTCTAAGTTAATAGAAGCTTCCGCAGATGTTATTGCAAAATTTTTAAAGAGTGACAGTCATAATCTCAAGTACATGGGCATCGATGCCCTTGGTCGGCTAATAAAGTTAAGTTCGCAAATTGCAGAACAACATCAACTAGCTGTGATTGACTGCTTAGAGGACCCAGATGATACTCTGAAGCGAAAAACATTTGAACTGCTATACAAAATGACCAAGTCCTCTAATGTGGAAGTGATTGTTGACCGTATGATTGAATACATGATTAACATAAGTGATGATCATTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCAGTGGTTTATACAGACCATGAATAAAgtttttgagcatgctggagaTCTTGTTAACATCAAGGTAGCACATAATTTGATTCGGTTGATTGCAGAAGGATTTGGAGAGGATGATGATGCTGCAGATAGTCAGTTGAGATCATCAGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCGAAGTTGCCATCTGTATTTCTTCAgGTCATTTGTTGGGTCCTGGGGGAATATGGCACAGCTGATGGAAAGCATACTGCTTCTTACATCACCGGGAAGTTATGTGACATAGCAGAGTCATATTCTGATGATGAAACTGTTAAGGCTTATGCAACTTCCGCACTGATGAAAGTTTATGCATTTGAAATAGCAGCTGGGAGGAAAGTGGATATGCTACCTGAGTTTTCTTTGACAGTAGAAATTAATAAGATTAGTTTCAATGGTCATTGTGCATTTGTTTATGCTCTTGAGGAACACATAAATCCTTGTCAATCTCTGATTGAAGAATTGCTAGCATCCCACTCTACAGATTTGCAGCAGCGTGCTTATGAATTGCAAGCTCTTGTTGGGTTGGACAGACAAGCTGTTGAATCTATTATTCCACGAGATGCAAGCTGTGAAGATATTGAGGTTGATAAGAACCTTTCATTCCTTAACGGTTATGTCCAACAGTCTCTAGAAAGGGGTGCTCAGCCATACATTCCTGAGGATGTGCGTGCTGGAATGGAGGACATGAGCAACTTCAGAGGCCAAGATAAGCATGAATCTTCACAGCATGGACTGAGATTTGAGGCATATGAACTTCCAAAGGCTCCAACACCATCAAAAGTTACTCCAGTTTCACATGCATCCCCAACAGACCTGGTTCCAGTACCTGAGACATTGTATTCTAGGGAGACCCACCATATCTCATCAGTGGCATCAGCATCAGAAGCAGGATCTTCAGGACTTAAGCTTCGGCTTGATGGTGTTCAGAGGAAGTGGGGCAGGCCAACTTATTCATCACCAACCACATCTAATACCTCAGACTCTTCTTCTCAAAAGCCAGTGAATGGAGTGACCCAGGTGAATGGTGCAAGTGCAGTAAATTCAAAAACACGTGATAGTTATGGTTCAAAAAAGCCACCGGTTGAAATTTCTCCAGAAAAGCAGAAACTTGCTGGTTTATTATTTGGTGGTTCAAGCCAGCCTGAGAAAAGACCATCTGCTAGTCATAAGGTTTCAAAGGCAAATACCAATGCTGCAGATAGATCTCAGGAATCGAACACTGCAATTGTATCCAATGAAGTAGCTGGGGAGAAAACAAATCATCAACCTCCTCCAGATTTGCTTGACTTGGGGGAACCAACTGTCACAACTGCTCCTCCCTCTGTGGACCCATTCAAGCAATTGGAAGGACTTCTTGATCCAAGTCTGAGTTCAACAACAGATTATAGTGCAGGTGCTAGTGCTACAACGAAAGCTCCTGATTTTATGGCACTTTATGGAGAGACAACCACGACAGGGATTAGTGCAAGTGGTGGCTATTCTATCCCTGTGAGTGGAGAAGTAAATCTTTTATCCGAGTTGTCAAATGCAGCTGTTAGCAGTTCCCCTGGAGAAACAATTGTGACGTCTTCATCTCATCCTGTGAAGGGTCCAAACGCTAAAGATTCATTGGAGAAGGATTCACTGGTGAGGCAGTTGGGTGTGAACCCATCAACTCAGAATCCCAACTTGTTCCGGGACTTGTTAGGGAGAGAATAA 3006 0.4268 MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRIIEPDIPKRKMKEFIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVIELLGHSKEAVRKKAIMALHRFYQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITIDANSYKDLVISFVSILKQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKQASESMYTVIGDIIRKGDSSSNIGNAILYECICCASSIHPNSKLIEASADVIAKFLKSDSHNLKYMGIDALGRLIKLSSQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMINISDDHYKTYIASRCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIKVAHNLIRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKHTASYITGKLCDIAESYSDDETVKAYATSALMKVYAFEIAAGRKVDMLPEFSLTVEINKISFNGHCAFVYALEEHINPCQSLIEELLASHSTDLQQRAYELQALVGLDRQAVESIIPRDASCEDIEVDKNLSFLNGYVQQSLERGAQPYIPEDVRAGMEDMSNFRGQDKHESSQHGLRFEAYELPKAPTPSKVTPVSHASPTDLVPVPETLYSRETHHISSVASASEAGSSGLKLRLDGVQRKWGRPTYSSPTTSNTSDSSSQKPVNGVTQVNGASAVNSKTRDSYGSKKPPVEISPEKQKLAGLLFGGSSQPEKRPSASHKVSKANTNAADRSQESNTAIVSNEVAGEKTNHQPPPDLLDLGEPTVTTAPPSVDPFKQLEGLLDPSLSSTTDYSAGASATTKAPDFMALYGETTTTGISASGGYSIPVSGEVNLLSELSNAAVSSSPGETIVTSSSHPVKGPNAKDSLEKDSLVRQLGVNPSTQNPNLFRDLLGRE 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4078 1001 MobiDBLite consensus disorder prediction 952 966 - -
Sto6g4078 1001 MobiDBLite consensus disorder prediction 817 842 - -
Sto6g4078 1001 SUPERFAMILY ARM repeat 10 615 IPR016024 -
Sto6g4078 1001 MobiDBLite consensus disorder prediction 747 842 - -
Sto6g4078 1001 Pfam Adaptin N terminal region 49 609 IPR002553 GO:0006886|GO:0016192|GO:0030117
Sto6g4078 1001 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 4 995 - -
Sto6g4078 1001 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 4 995 - -
Sto6g4078 1001 MobiDBLite consensus disorder prediction 750 790 - -
Sto6g4078 1001 PIRSF AP4_epsilon 561 698 IPR017109 GO:0015031|GO:0030124
Sto6g4078 1001 PIRSF AP4_epsilon 1 567 IPR017109 GO:0015031|GO:0030124
Sto6g4078 1001 PIRSF AP4_epsilon 713 862 IPR017109 GO:0015031|GO:0030124
Sto6g4078 1001 PIRSF AP4_epsilon 955 1000 IPR017109 GO:0015031|GO:0030124
Sto6g4078 1001 MobiDBLite consensus disorder prediction 952 1001 - -
Sto6g4078 1001 Gene3D - 3 622 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4078 Sto-Chr6 44377937 44383971 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4078 K12400 - gmx:100806914 1504.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4078 6 44377937 44383971 Sto6g4078 6 44377937 44383971 ECH