Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4057 ATGGGGTTTCTACAGTTGCTTGTTGTTGCCTCTTTCCCAgtgatcaaattattaataatcaCTGCAATTGGCTTATTTCTGGCATTGGATCACATAGATATATTGGGAGCTAGTGCAAGGAACCACCTCAATGATATtgtgttttatgttttaaatcCTGCATTGGTGAGTAGCAATTTGGCCAATACAATCACTTTCGAGACTTTTGTTTCCCTGTGGTTCATGCCAGTCAATATTCTTGCTACATTTATAGTAGGCTCCGCTCTAGGATGGATCATTACAAAGGTCACAAGGACTCCCAAACACTTGGAAGGTCTCATATTGGGTTGCTGTTCTGCAGGAAATTTAGGGAACTTGCTTATAATCGTTGTCCCGGCCATATGTAAAGAGAAAGGCAGTCCATTTGGGGACTCTGATGTTTGCTATAATTATGGGATGGCTTATGCTTCACTTTCTATGGCGATTGGAGCTATTTTTATATGGTCCTACGTTTACAACATAATGCGAATTTCCGCAAACCAAATCCCCAGAGCAAGCATCTCCAGTGAGCAATTAAGCATTCTGAGATCTTCAGGGGCACTAACAGAACCATTCCCAGAGTTAAACTTAGAAACAGACAGTCCTACAAAAGATGCCACCGATGATGCATACTCCATGTTGGTTCCTTCCTCAGAGTCTGAGATAAAAGTATCATTCTCAGAAAGAATCAAGCAATACTTTAGGAGGATGTTAACTAATCTCAACCTCAAGGCTATATTTGCGCCAGCAACCCTTGGGGCGATAGGTGGGTTTTTGGTTGGTATAATTTCTCCACTTCGTAATCTCATGATTGGCAGTGATGCTCCACTTCGCGTGCTCGAAGACTCTGCTATCATGCTAGGTGATGCAGCCATCCCATCTATAACCCTTGTAATGGGTGCAAACCTCCTTAGAGGATTGAAGGGAACAGGGAGTCTATTATGGACGATTGGAGGAGTGATAATAGTTCGATATATTCTGCTACCAATAGTGGGCGTTCTGATAGTTAAAGGGGCAGTATATATTGGTGCTGTGCCACAAGATCCCTTATACCAGTTTATGCTTCTACTTCAATATGCACTTCCTCCAGCTATGAATATAGCCACGATTGCTCAATTGTTTGGAGCTGGTGAGAGTGAATGTTCTGTGATAATGCTGTGGACATATGTTTTGGCATCTGTTGCAGTTACTCTTTGGTCCACCTACTTCATGTTGCTAGTCTCCTGA 1245 0.4145 MGFLQLLVVASFPVIKLLIITAIGLFLALDHIDILGASARNHLNDIVFYVLNPALVSSNLANTITFETFVSLWFMPVNILATFIVGSALGWIITKVTRTPKHLEGLILGCCSAGNLGNLLIIVVPAICKEKGSPFGDSDVCYNYGMAYASLSMAIGAIFIWSYVYNIMRISANQIPRASISSEQLSILRSSGALTEPFPELNLETDSPTKDATDDAYSMLVPSSESEIKVSFSERIKQYFRRMLTNLNLKAIFAPATLGAIGGFLVGIISPLRNLMIGSDAPLRVLEDSAIMLGDAAIPSITLVMGANLLRGLKGTGSLLWTIGGVIIVRYILLPIVGVLIVKGAVYIGAVPQDPLYQFMLLLQYALPPAMNIATIAQLFGAGESECSVIMLWTYVLASVAVTLWSTYFMLLVS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4057 414 Pfam Membrane transport protein 12 405 IPR004776 GO:0016021|GO:0055085
Sto6g4057 414 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 413 - -
Sto6g4057 414 PANTHER - 1 413 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4057 Sto-Chr6 44227424 44230793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4057 K24139 - gmx:100817605 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4057 6 44227424 44230793 Sto11g1364 11 13174076 13178315 CCT
Sto6g4057 6 44227424 44230793 Sto6g4057 6 44227424 44230793 ECH