Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4029 ATGACGAGCATAAAGCCATTGTCCGAAGCTGTTCGTAGTTCATTACGTTCTGGCATTTTCTTGTTCGACTTGACGAGGGTCGTTGAAGAACTGGTTTTCAATAGCTTGGATGCGGGCGCAACGAAGGTGTCAGTCTTTGTAAGTGTTGGGAACTGTTATATAAAAGTAATCGATGATGGAGCTGGTATTACTCGAGATGGATTGGTCTTGATTGGAGAAAGATACGCAACATCAAAGTTACTCAGTTTGACTGATCTGGATGCCCCAAATGAAAACTTTGGTTTTCGGGGGGAAGCTTTAGCTTCCATTTCAGAAGTCTCGCTGTTGGAAATTTTGACAAGAACTTATGGAAGGGCAAATGGATATCGCAAAGTATTGAAGGGTTGCAAGTGTCTATATCTTGGTATAGATGATGATAGAAAGGAAGTGGGAACAACagTTGTTGTCCGTGATTTATTTTACAACCAACCAGTTCGGAGGAAATATATGCAATCcagCCAAGTGAAGGTTCTGCAATCAGTCAAGAAATGTGTGCTGCGGCTTGCACTTGTGCgtcctaatatttttttcaaagttgTTGATATTGAAAGTGAGGATGAACTTCTTTACACACATGCTTCTTCACCACTGCCACTTATAACGAATGGCTTTGGGGTGGAGGTCTCAAGCTCTCTTCATGAATTACAAATTCAGGATGATATCATAAAGCTTTCTGGATACATATCTACTCCCTGCAATAGTTTTACCTTGAAGGCTTTACAGTATGTCTGTATCCATTTCGTTTGCAAAGGCCCAATTCATAAGCTTCTGAGTCAACTGGCTAATAGATTTGAGCATCTGGACTTCTGGAATGCTGATGGAAAGTTCCTGAACAAGAAGAGAAGTAGGTCTCAACCATGTCCAgcttatatattgaatttgagtTGCCCACGGTCTATGTATGATTTAACCTTTGAACCATCAAAGACTAGTGTTCAATTTAAGGATTGGGATTCTATACTGAGCTTCATTGAGAAGGCAATCAAACAATTCTGGGAGAACATAACTCACGCTCTTGTGGTACAAGCAGATCAACTGGGCAAGGCAGTTGACAATGCCATTTCAGAAGAAGCAGATTTCTTAGATGCAGATATATTGAAATGTGGAAACCTAGACCGCAAGGATTGCCTTGACTTTTTCTTTCCCACTTCAGACAAGCTAACTGAAGATGACCATCGTCTATCCACCAGAGAAGACATTAGATCCTCTCTTGGTTATTTGCATAGGGGCACTGCAAAGTTTGAAGACAAACAAAATAAGAGAGATTTTCTATGTCAAACTGGTTACTCTAACTTTTCAATGGATGGATCATATAACAAATGTGAGTCCACCGTGACTGAAAAGCATAACAGTCTGTATGATAACCATGGTCTATCTAGACGAGACTATTCTTTGGGTGGTGAATTTGCTGCTGCAGAGATCTTCACTAATAATGTATCTTTTGATGCACCAAGCTCGTCAAATGGAAAAAATTTCCTTGAAGTGGATGGTGTTGTCTTCAGTGAATCATCTGAAGGTGCTTTACGTTATGACTGTCGTGAGCTCTGTAATGATATAGAGATCAATGGGGATCTTCAAAAGCCTTTTCTGAGGAGTTGCTCTATAGAAGGAAGTATCCAGCATGAGAAAGTTTTGTTTGCAAATGATGAACTTGAATTCAGAACTGACTGCTTCGGTACCAAGCATGATCTGGGAAAATATTTTGGCAGTGGTGAGGATTTAGGTGCCCCACCCTGCCCCAAAGTTGTAGAAATATTTGACACATCTAGAGCATCTGCTGAAGAAAACTGTTTCCCTTCAGATTCATGCTATTCAAAAACACAAAAAGAACACTCCAGGTGTGACCATGAGTTTTTAACATCAGAACGGTGCCATATCTACGAGACACTCTTACCTGAAGCCACTTCTTGGGATGTCGATCATATGACAAGTTCTTATCTTGATGATCTACAAGGCATACCAAGATACTATAAAATGGGTAGTTGTTCAAAAATTATAGATGATGAAGAAAATAGACGCAACTTCAGTTGCAATATCTCAAGCAGTTTCATCTCAGATCAGTGCACcacaagttttggaaacactgaaTTGTATTTTGATGGTCCCAGTGAttctaacaaaataaaatttacccAATGGTCAGATTCTAGGTTGATTGATTGGCCTGACTGTGATGATATATATTTGAACAAATGGTCAAATATTTTAACAGGTGAGTCAAATTGGTTCTCTCCACAATCATTTGGTGTACACTACAAGAGACATGGAAAGAACCGAGTCGAAAAGGATCATGTTAGACATCCAACTTCAGAAAAGAATCTTGACAGATCGAGAAGGAGCTTTTCAGCCCCTCCATTTTATAGAAGCAAAAGAaggttttattgtttaaatCAACCTTCAAAAACTATATCCAAAAGACCAGCTCGCCAAACCTCCGACCATGCTTTACAAGACAGAGAAGCTGGCAAATCTGAACGTTCTCAACAATCTTTTGGCCCACTTCACCCCATCGCTGAGGAACATTTATTGCTTAAAAATAATTCCAATATGAATCTGAGGACAGATAGTGTGGGAGATATGGAGCAGGTTGATAACAGTATAGAGTTTGATGGGTTTCAATGTTTTAGTAGTCAAAGCAATGCTTCATTTAAAGAATTGATATCAAGGAAAGTGGAAGATTTCAAAGATTACAGGACAAAATGGCAGAACTGCTCACCTGAAATTCCAAAGAGGGATAGATCACTTGATCATCAGAGCCAAAACAATATACTTGACATATCTTCTGGATTTTTGCATCTTGCTGGTGATTCGTTAGTACCTGAAACTATTGGTAAGAACTGCCTTGAAGATGCCAGAGTTCTTCATCAGGTGGATAAAAAATTCATTCCAGTTGTGGCTGGCAAAACCCTTGCTATTATTGATCAGCATGCTGCAGATGAAAGAATCAGATTGGAAGAATTACGTCAAAAGGTATTATCAGGAGAAGCAAGGACAATAAACTATCTAGATGCTGAACAGGATCTGGTACTGCCAGAGATTGGTTATCAACTACTGTACAGTTATTCTGAACAAATTAAAGATTGGGGATGGATCTGCAACATTCATGCTCAAGATTCTAAATCTTTCAAGAAGAATTTGAATATTCTCAACAGACAGCCAGTTTCCATCACACTTATTGCGGTACCCTGCATTTTAGGTGTCAATTTAGATGATGTTGATCTTATGGAATTTCTTCAGCAGCTTGCTGACACTGATGGATCTTCAACAATGCCACCCTCTGTTATACGAGTTCTAAATTCTAAAGCATGCAGAGGTGCAATCATGTTTGGAGACTCTTTGCTTCCATCTGAGTGTTCTCTTATCGTTGATGAGCTAAAGCAGACATCACTGTGCTTTCAATGTGCTCATGGGCGACCAACTACCGCTCCTCTTGTTAACTTGGAGGCACTGCATAATCAGATTGCGAAGCTTGGACAAATGAATGATTGTTCAACTGACATGTGGCATGGGTTACGTAGACATAAAATAAGTGTGGACCGTGCAGCACAACGCTTATGTTCTAGTAGAAAGTAG 3612 0.387 MTSIKPLSEAVRSSLRSGIFLFDLTRVVEELVFNSLDAGATKVSVFVSVGNCYIKVIDDGAGITRDGLVLIGERYATSKLLSLTDLDAPNENFGFRGEALASISEVSLLEILTRTYGRANGYRKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSQVKVLQSVKKCVLRLALVRPNIFFKVVDIESEDELLYTHASSPLPLITNGFGVEVSSSLHELQIQDDIIKLSGYISTPCNSFTLKALQYVCIHFVCKGPIHKLLSQLANRFEHLDFWNADGKFLNKKRSRSQPCPAYILNLSCPRSMYDLTFEPSKTSVQFKDWDSILSFIEKAIKQFWENITHALVVQADQLGKAVDNAISEEADFLDADILKCGNLDRKDCLDFFFPTSDKLTEDDHRLSTREDIRSSLGYLHRGTAKFEDKQNKRDFLCQTGYSNFSMDGSYNKCESTVTEKHNSLYDNHGLSRRDYSLGGEFAAAEIFTNNVSFDAPSSSNGKNFLEVDGVVFSESSEGALRYDCRELCNDIEINGDLQKPFLRSCSIEGSIQHEKVLFANDELEFRTDCFGTKHDLGKYFGSGEDLGAPPCPKVVEIFDTSRASAEENCFPSDSCYSKTQKEHSRCDHEFLTSERCHIYETLLPEATSWDVDHMTSSYLDDLQGIPRYYKMGSCSKIIDDEENRRNFSCNISSSFISDQCTTSFGNTELYFDGPSDSNKIKFTQWSDSRLIDWPDCDDIYLNKWSNILTGESNWFSPQSFGVHYKRHGKNRVEKDHVRHPTSEKNLDRSRRSFSAPPFYRSKRRFYCLNQPSKTISKRPARQTSDHALQDREAGKSERSQQSFGPLHPIAEEHLLLKNNSNMNLRTDSVGDMEQVDNSIEFDGFQCFSSQSNASFKELISRKVEDFKDYRTKWQNCSPEIPKRDRSLDHQSQNNILDISSGFLHLAGDSLVPETIGKNCLEDARVLHQVDKKFIPVVAGKTLAIIDQHAADERIRLEELRQKVLSGEARTINYLDAEQDLVLPEIGYQLLYSYSEQIKDWGWICNIHAQDSKSFKKNLNILNRQPVSITLIAVPCILGVNLDDVDLMEFLQQLADTDGSSTMPPSVIRVLNSKACRGAIMFGDSLLPSECSLIVDELKQTSLCFQCAHGRPTTAPLVNLEALHNQIAKLGQMNDCSTDMWHGLRRHKISVDRAAQRLCSSRK 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4029 1203 SUPERFAMILY DNA mismatch repair protein MutL 964 1157 IPR037198 -
Sto6g4029 1203 MobiDBLite consensus disorder prediction 815 845 - -
Sto6g4029 1203 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Sto6g4029 1203 SMART MutL_C_2 966 1126 IPR014790 GO:0005524|GO:0006298
Sto6g4029 1203 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1162 IPR028830 GO:0006298
Sto6g4029 1203 MobiDBLite consensus disorder prediction 775 791 - -
Sto6g4029 1203 Gene3D - 1010 1121 IPR042121 -
Sto6g4029 1203 SMART DNA_mis_repair_2 213 346 IPR013507 GO:0005524|GO:0006298|GO:0030983
Sto6g4029 1203 CDD HATPase_MutL-MLH-PMS-like 11 193 - -
Sto6g4029 1203 Pfam MutL C terminal dimerisation domain 965 1126 IPR014790 GO:0005524|GO:0006298
Sto6g4029 1203 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 118 - -
Sto6g4029 1203 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1162 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Sto6g4029 1203 SUPERFAMILY Ribosomal protein S5 domain 2-like 202 346 IPR020568 -
Sto6g4029 1203 Gene3D - 969 1155 IPR042120 -
Sto6g4029 1203 MobiDBLite consensus disorder prediction 772 795 - -
Sto6g4029 1203 MobiDBLite consensus disorder prediction 820 838 - -
Sto6g4029 1203 Gene3D - 215 351 IPR014721 -
Sto6g4029 1203 Gene3D - 2 207 IPR036890 -
Sto6g4029 1203 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22 199 IPR036890 -
Sto6g4029 1203 Pfam DNA mismatch repair protein, C-terminal domain 216 344 IPR013507 GO:0005524|GO:0006298|GO:0030983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4029 K08739 - gmx:100788019 1404.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4029 6 44027556 44037383 Sto6g4029 6 44027556 44037383 ECH