Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4004 ATGGAACATCATGAAGCAGATTCATTTAAACCCGAGGAGCAGTTATCTGACATGAATCATCACAAACCTGAAAGCAATGGAATTCTCAGTTTGGAAAATGGCTTACCTGATGGTAACCCATGTCCAGCTGATACTCATGATCAGCTTCTTCAAATGGTCGTTGAacttaaatttgagaatgaatTCTTGAAGTCTCAGTTTGAAGGCTTTAGCAGTCTAAACAGTGTACATAGTGACTCTAGTCTGCAAAAAAACGTTGGTGGCCCAGAGGATTCCCAGTCTGACATCATTGAAGAGCTGCAGGAAAGGATACAATCATTAAATAAAGAACTTCTGGATGAAAAACAAACAAGAGGTGCAGCTGAAGAGGCTCTGAAGCATCTTCAAGTGGCATACTCAGAGGCAGATGCGAAAGTCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACGAAGTTGGAACAAGAAATAAAAGAACGTGAAGAGAAGTATGCCGAACTTGACTTGAAGTTTAACAGGCTTCACAAGCGAGCAAAACAACGTATTCAGGAGGTTCAAAAGGAAAAAGATGATCTTGAGGCTCGATTCCTTGAGGTAAATGAGAAGGCTGAGCATGCATCATCCCAGCAGTCATCATTGCAACAGGAGTTAGAACGCACAAGGCAACAAGCAAATGAGGCATTGAAAGCCATGGATGGGGACAGGCAACAACTGAGAAGTGCAAATAACAAACTTCGAGATACCATTGAGGAATTACGGCGTTCATTGCAACCGAAAGAGAGTGCCCTTGAGGCATTGCAACAGACACTTGCAGAGAAGGAACAGATGTTGGAGGATATGAAAGGTTTGCTTCAGGCTGCTGATGAAAAAAGGCAAACTGCACTGACAGAGCTTTCAGCTAAACATCAAAAGAATATAGAGAGTTTGGAGGCCCAACTTAATGATGCAATATCTGATAGAAATAAAGCGGCTGAAACTATTTCTTCACTGCAGATGCTAGTTGCAGAGAAAGAGTCTAAAATTGCAGAGATGGAGGCAGCATCAACTGGCGAAGCTGCACGACTTAGAGCAGCTGTTGAAAGTGTGAAAGGGGAGCTTTCTCACCTCAAACAGGAGCATgagaaagaaaaggaaagctGGGAGACCGCATCTCAGGCACTTAGAGCAAAACTTGAAATTGCAGAGAGCAACTGCATACATGCTGAAATTGAAGTAGCTAAAATGAGAAGTCAGCTGGAATCCGAGGTGTCTGCACAAACAAGGATTCTCAATATGAGAGATGCAGATTTGTTGGCTGCCAAGGAAGAGATAAGCCGCCTGGAGAATGAATTTTCCTCGTACAAAGTTCGTGCACATGCTCTTCTTCAGAAGAAGGATGCTGAACTGGCTGCAGCTAAAGACTCTGAGCAACTTCAAGCTCTTGAGGAAGCTTTAAAAGAGGCcgaaaatgaaatattatcaaTAACGGCAGAAAGGGATAGAGTTCTTCAAGACCTTCAATATTCTGCAGGAAATCATGAGAAAGAACTCACCAAAAGAGACACAGCCCTTGAAGATGCCAAGGAGCAGATAAGGAACTTAGAAATAAAACTTGATTCTGCTAATGCTCAGCACCTCAAAGAGAAAGAAGCATGGGGACTAAGCCTTCAAAATGTTGAAGAAACCTGGCGAATTAAATATGAGGCAATGAAGGCTGAAAATGAAGGATCTTCAGCACATGATGTAAAACTACGGAAGGAATTTGAAGAACTCAGACAACAGTACAAAAAATTGAAGGAAGAGCATGATTCTTTTCGTGATCTTGCTGATAGAATGATTGAGGAGAAAGACAATGAAATATCTAGACTTctagatgataataataatcttCATCAGGCCCAGCAATCTAGCCCATTGGTACATTCTTCTCTTTATTTATGTACAGCCTTGCATAAAGGGGATTTACTGAGTTTAAGCCCCTCATCTGCCGAACAGCAAATTCTGCTGCTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGTTGGCACGATCACAGCGGCACATTTTAGCTCTTCAAGAAGAAATAGAGGAACTTGAACGTGAAAATCGTCTCCACAACCAACAGGAAGCTATGTTAAAGGCTGAGCTACGTAACAtggaaagaacaaaaaagagGGAAGGAGTAGATATGACCTACttgaaaaatgttatattaaaacTTCTTGAGacagGTGAAGTGGAAGCATTATTGCCAGTTATTGCAATGCTGCTTCAGTTTAGTCCAGATGAGATGCAGAAGTGTCAACAAGCGTATCGCAACTCAACAGAAGTTCCACCAAGTCCAGGAAGTGAAACTTCAGGATCTGGCTTATCACTTTTCTCAAGATTTGCTTTTTCATAG 2379 0.4044 MEHHEADSFKPEEQLSDMNHHKPESNGILSLENGLPDGNPCPADTHDQLLQMVVELKFENEFLKSQFEGFSSLNSVHSDSSLQKNVGGPEDSQSDIIEELQERIQSLNKELLDEKQTRGAAEEALKHLQVAYSEADAKVQELSEKLAEAQTKLEQEIKEREEKYAELDLKFNRLHKRAKQRIQEVQKEKDDLEARFLEVNEKAEHASSQQSSLQQELERTRQQANEALKAMDGDRQQLRSANNKLRDTIEELRRSLQPKESALEALQQTLAEKEQMLEDMKGLLQAADEKRQTALTELSAKHQKNIESLEAQLNDAISDRNKAAETISSLQMLVAEKESKIAEMEAASTGEAARLRAAVESVKGELSHLKQEHEKEKESWETASQALRAKLEIAESNCIHAEIEVAKMRSQLESEVSAQTRILNMRDADLLAAKEEISRLENEFSSYKVRAHALLQKKDAELAAAKDSEQLQALEEALKEAENEILSITAERDRVLQDLQYSAGNHEKELTKRDTALEDAKEQIRNLEIKLDSANAQHLKEKEAWGLSLQNVEETWRIKYEAMKAENEGSSAHDVKLRKEFEELRQQYKKLKEEHDSFRDLADRMIEEKDNEISRLLDDNNNLHQAQQSSPLVHSSLYLCTALHKGDLLSLSPSSAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHNQQEAMLKAELRNMERTKKREGVDMTYLKNVILKLLETGEVEALLPVIAMLLQFSPDEMQKCQQAYRNSTEVPPSPGSETSGSGLSLFSRFAFS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4004 792 Coils Coil 90 347 - -
Sto6g4004 792 Coils Coil 510 544 - -
Sto6g4004 792 MobiDBLite consensus disorder prediction 1 20 - -
Sto6g4004 792 MobiDBLite consensus disorder prediction 1 43 - -
Sto6g4004 792 Coils Coil 423 498 - -
Sto6g4004 792 MobiDBLite consensus disorder prediction 762 782 - -
Sto6g4004 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 50 769 - -
Sto6g4004 792 Coils Coil 352 411 - -
Sto6g4004 792 Coils Coil 574 626 - -
Sto6g4004 792 Coils Coil 674 718 - -
Sto6g4004 792 Pfam GRIP domain 720 759 IPR000237 -
Sto6g4004 792 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 50 769 - -
Sto6g4004 792 SMART 1grip 719 763 IPR000237 -
Sto6g4004 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Sto6g4004 792 Gene3D - 90 259 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4004 - - gmx:100775990 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4004 6 43898788 43908886 Sto6g4004 6 43898788 43908886 ECH