Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4002 ATGGAGGGTCTACTTCGTTCCCCTGCAAATTTCGTTCCTCTGTCTCCCATAAGCTTCTTGGAGAGAGCAGCCAAGTTTTCCGGTGAGACAAGCTCTGTTCTGTACGGTTCTTCCACCTCCAATTGGGCTCAAACCCATCAACGTTGTTTAAAACTAGCTTCTGCTCTCACCCAATTAGGGATTTCCCGTGGGGATGTGGTTGCTACCCTATCACCCAACGTCCCTGCAATGTATGAACTGCATTTTGCAGTACCAATGGCTGGAGCAATTCTTTGTACTCTTAATGCACGTCTTGATGAAATTATGCTTTCAATCCTACTGGAACATTCGCAGGCAAAGGTCCTTTTTGTAGACTACCAATTACTCCAAATTGCAAGGGGAGCGCTGAAGCTACTAGGGAAAAGAGCAAGAGACTTACCTACTTTAGTTCTAATCACTGACTCCGATTGCCCTTCTACCATTGATACTTCTTCAGTCAGCTATGAATATGAGAAGCTACTATCTACTGGGAACAGTGGGTTTGAGATTGTGAGACCAAATAGTGAATTTGACCCTATAAGTGTGAACTACACCTCTGGCACCACATCTAGGCCAAAAGGGGTTGTGTATAGTCACAGAGGTGCCTATTTGAACTCTCTGGCTACTGTGCTTCTCTTTGGAATGGGGTTTATGCCTGTTTATCTCTGGACTGTGCCTATGTTTCACTGCAACGGATGGTGTCTACCTTGGGGAATGGCAGCTCAGTGTGGGACCAATGTGTGCATCAGAAAAGTCTCTCCAAAGGACATATTTGAGAAGGTGAGTAAGCACAAGGTGACACACATGGGAGGAGCTCCTACAGTGCTGAACATGATTGTGAACTCTGCAGTGAGTGATAGAAAGGCCTTTACCCACAAGGTGGTGGCGATGACAGGTGgttctccaccaccaccacagaTCATATCCAAGATGGAGGAGATTGGTTTTAGTGTTTCTCACCTGTATGGCCTTACAGAAACATATGGTCCTGGGACTTCATGTGAATGGAGATGTGAGTGGGACAATCTGCCTGCTGAAGAGAAATACAAGATGAAAGCTAGACAGGGAATGCCCCATGTGGGTTTGGAGGCAATAGACATAAAAGATCCTATCACAATGGAAAGTGTCCCAGCTGATGGTAAAACAATGGGTGAGGTAATGTTTAGAGGAAACACAGTGATGAGTGGATATCTCAAAGATTTGAAAGCAACAGAGGAAGCTTTCAAACATGGGTGGTTTCATAGTGGGGATCTAGGAGTGAAACACAGTGATGGGTATATAGAGATAAAGGACAGATTGAAGGACATAATAATCTCAGGGGGAGAGAATATAAGCTCAGTGGAGGTAGAAACAGTTTTATATAGCCATCCAGCAGTGGTTGAAGCTGCAGTGGTGGCCAGGCCAGATGATCATTGGGGCCAAACACCTTGTGCATTTGTGAGCTTGAGAGAAGGTTTTGATGCAGATTCTCAAGAAATAATCAACTTTTGTCGAAACCGTTTGCCCCATTACATGGCTCCTAAGACAGTCATTTTTGAGGATTTACCAAAGACTTCAACAGGTAAGATACAGAAATATGTTCTCAGAGAGAAAGCCAAGGCCATGGGCAGCCTTTCTTGA 1638 0.4408 MEGLLRSPANFVPLSPISFLERAAKFSGETSSVLYGSSTSNWAQTHQRCLKLASALTQLGISRGDVVATLSPNVPAMYELHFAVPMAGAILCTLNARLDEIMLSILLEHSQAKVLFVDYQLLQIARGALKLLGKRARDLPTLVLITDSDCPSTIDTSSVSYEYEKLLSTGNSGFEIVRPNSEFDPISVNYTSGTTSRPKGVVYSHRGAYLNSLATVLLFGMGFMPVYLWTVPMFHCNGWCLPWGMAAQCGTNVCIRKVSPKDIFEKVSKHKVTHMGGAPTVLNMIVNSAVSDRKAFTHKVVAMTGGSPPPPQIISKMEEIGFSVSHLYGLTETYGPGTSCEWRCEWDNLPAEEKYKMKARQGMPHVGLEAIDIKDPITMESVPADGKTMGEVMFRGNTVMSGYLKDLKATEEAFKHGWFHSGDLGVKHSDGYIEIKDRLKDIIISGGENISSVEVETVLYSHPAVVEAAVVARPDDHWGQTPCAFVSLREGFDADSQEIINFCRNRLPHYMAPKTVIFEDLPKTSTGKIQKYVLREKAKAMGSLS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4002 545 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Sto6g4002 545 Gene3D - 440 542 IPR045851 -
Sto6g4002 545 CDD ttLC_FACS_AEE21_like 11 536 - -
Sto6g4002 545 Pfam AMP-binding enzyme 21 445 IPR000873 -
Sto6g4002 545 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 5 544 - -
Sto6g4002 545 SUPERFAMILY Acetyl-CoA synthetase-like 9 539 - -
Sto6g4002 545 Gene3D - 6 439 IPR042099 -
Sto6g4002 545 PANTHER ACYL-ACTIVATING ENZYME 5 544 - -
Sto6g4002 545 Pfam AMP-binding enzyme C-terminal domain 454 528 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4002 Sto-Chr6 43876085 43877970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4002 77 545 Miscellaneous Gene Families AT1G20560 64.119 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4002 - - gmx:100500429 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4002 6 43876085 43877970 Sto6g4002 6 43876085 43877970 ECH