Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g4001 TTGTCTGCAAACTACTTGGCGTTATCGCCTACGAGTTTCTTGGAAGCAGCAGCTTCTGCCTATGCTGATAAGCTCTCCATCATCTATGGTGATCTCACCTTTTCTTGGTCCCAAACCCATCAAAGATGCCTCAAGCTCGCTTCTTCTTTGCTCAACTTGGGAATTTCTCACCCTCATATTGTTGCAGTTTTGGCACCAAATATTCCAGAGCTGTATGAGCTGCATTTTGCTGTTCCCATGTCAGGGGCTGTTATTTCTGCTCTAAACATCAAATTGGATGTACCAACATTGGCTACGATATTGGAACAATTAGAGGCTGAACTTATGTTTGTGGACTATGAGTTTGTTGAACTTGCCCTTCAAGCGTTTGACATAATGTCTCAGAGAAGATGCAAGCCACCTCGCTTTGTTCTTATCCCAGATCATAATAACCAAAAGCCGTCTTTCTTTGTCAAGAATCTCCCACCAGATACCCTCAATTTCAATGATTTGCTTGCAAAGGGACAAGCAGATTTTAAGACTATAATGGTAAACGATGAATGTAATCCTATATCAGTAAATTATACATCAGGGTCCACAGGGATTCCTAAAGGAGCTGTTTATAGTCATAGAGGTGCCTATCTTAATTCATTGGCAGCTATCACTCGTTTTGACATGAAACGAATGCCTGTGTTTCTGTGGACAGTGGACATGTTTCGCTGCAATGGGTGGTGCTTCACTTGGGCTATGGCTGCTCTGGGTGGCACCAATATTTGTCTCAGAAATGTCTCAGCAAAAGCCATTTTTGAAGCAATCCATCTTCACAAGGTGACTCATCTGTGTGGTGCACCGGCCCTTCTGAACATAATTGCAGATGCACCCATTAGTGATCAGATTAGGCCTCTGCCATTGGGTGTGAGTATCACTGTTGCTGGTGTGCTACCATCATTCAAAGTTTTCTACAAGGTAGCAGAACTTGGATTCAATGTGAATGTAGGATATGGTATGACAGAGGCTATGGGTCCTACATTGGTAAGACCTTGGAAACCCAATTCAGGTGATGAACTCACTCAGCTACTTACTTATGTTGCTCAAGGGGAAATTGATGTGAAAGATCCAATGACTATGAAGAGCACCTCTTGGGATGGAAAATCCATTGGTGAGATCACACTCAGAGGCAACACATTGATGCTGGGGTACCTTAAGAATCCACAAATAACAGAGAAAGCTTTTAGGTGTGGGTGGTATTGGACAGGTGACCTTGCAATGAGGCAAAGTGATGGTTCTATAAGATTGAAGGATAGAGCAGAGGATATGATATATTCAAAGGGAGAGGCTGTGAGCTCACTGGAGGTAGAGGCAGTGTTGCTGAGTCACCCAAAGGTTTTGAATGCTACAGTTGTGGGGAAATATGATGACCATTTGGAACAGTTTCCTTCTGCAATTATCAAATTGAAGGAAGGATGTTGTGCTACTGTGGATGATATCATCAAGTTTTGTGAAGCCAAGTTGGATACTCATATGCTTCCTAAGAGTGTAGTTTTTGGGGATGTGCCTGTTAGCTCAACTGGGAAGGTGCAGAAATTTCTCATCAGAGAGAAGATCAAATGCAATGGTTGGTGA 1602 0.4282 LSANYLALSPTSFLEAAASAYADKLSIIYGDLTFSWSQTHQRCLKLASSLLNLGISHPHIVAVLAPNIPELYELHFAVPMSGAVISALNIKLDVPTLATILEQLEAELMFVDYEFVELALQAFDIMSQRRCKPPRFVLIPDHNNQKPSFFVKNLPPDTLNFNDLLAKGQADFKTIMVNDECNPISVNYTSGSTGIPKGAVYSHRGAYLNSLAAITRFDMKRMPVFLWTVDMFRCNGWCFTWAMAALGGTNICLRNVSAKAIFEAIHLHKVTHLCGAPALLNIIADAPISDQIRPLPLGVSITVAGVLPSFKVFYKVAELGFNVNVGYGMTEAMGPTLVRPWKPNSGDELTQLLTYVAQGEIDVKDPMTMKSTSWDGKSIGEITLRGNTLMLGYLKNPQITEKAFRCGWYWTGDLAMRQSDGSIRLKDRAEDMIYSKGEAVSSLEVEAVLLSHPKVLNATVVGKYDDHLEQFPSAIIKLKEGCCATVDDIIKFCEAKLDTHMLPKSVVFGDVPVSSTGKVQKFLIREKIKCNGW 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g4001 533 Gene3D - 430 531 IPR045851 -
Sto6g4001 533 PANTHER ACYL-ACTIVATING ENZYME 17 530 - -
Sto6g4001 533 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Sto6g4001 533 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 17 530 - -
Sto6g4001 533 Gene3D - 3 429 IPR042099 -
Sto6g4001 533 Pfam AMP-binding enzyme 15 434 IPR000873 -
Sto6g4001 533 SUPERFAMILY Acetyl-CoA synthetase-like 9 527 - -
Sto6g4001 533 Pfam AMP-binding enzyme C-terminal domain 444 518 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g4001 Sto-Chr6 43870603 43873758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g4001 71 529 Miscellaneous Gene Families AT1G20560 46.581 3.09e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g4001 - - lang:109330780 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4001 6 43870603 43873758 Sto6g4001 6 43870603 43873758 ECH