Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3941 ATGGGAATGAGAGCAGCTTTATTAGCTTCCCACATTCTCTTGCTCTGTTTCTATGGCTCTCTAGTTTGTGCCAAATACAATAGGTACAACACCGCCTCTGGAATCGTTGAAGGCAAATTGAATGTTCATTTGGTTCCACACTCCCATGACGATGTGGGTTGGCTCAAGACCGTTGATCAGTACTACGTTGGATCAAATAATAGTATTCAGGGGGCTTGTGTTGAGAATGTGCTGGACTCGCTTCTGATGTCTCTTCCGCGTGATCCTAATAGGAAGTTCGTGTATGCGGAGATGGCGTTTTTCCATCGATGGTGGGTAGAACAAAGTCCAGAAACGCAAGAGCAAATGACAAAACTGGTGAATGCGGGTCAGCTGGAATTCGTAAATGGTGGATGGTGCATGCACGACGAGGCCACGTGTCACTACATAGACATGATTGACCAAACCACTCTGGGGCATCGTTtcataaaggaccaattcaaTAAGGTTCCTCGAGCTGGATGGCAGATTGATCCATTTGGACACTCTGCAATCCAAGCTTACCTACTTGGTGCTGAGCTGGGGTTCGACTCTGTACACTTCGCTAGGATTGATTATCAGGACAGAGCCGTTCGTAAAAATAATAAGACTCTTGAAGTTGTGTGGCGTGGCTCCAACACATTTGGTTCCTCAGCCCAGATTTTTGCGAACGCTTTTCCTGTTCATTATAGTCCACCAACTGGTTTTCATTTTGAAGTGGATGACGACTACGTTCCCGTACAGGACGATCCTCTTCTATTTGATTACAACGTTGAACAGCGAGTCAATGACTTCATTGACGCTGCCATCACCCAAGCGAATGTGACCAGAACCAACCATATTATGTGGACAATGGGTGATGATTTCATGTACCAAAATGCAGAGACTTGGTTTAAGCAGATGGATAAACTAATTCACTATGTTAACAAGGATGGTAGAGTCAATGCCCTCTATTCTACTCCATCTCTCTACACAGATGCAAAAAATGCTGCCAAACAATCATGGCCactgaaaactgatgattactTCCCTTATGCCGATGGAGCAGATTCTTATTGGACAGGCTTTTTCACCAGTCGCCCTGCATTGAAGCGATATGTTAGGATGCTAAGTGGATACTATTTgGCAGCAAGGCAACTTGAATTTTTCGTGGGAAAAAAGCCTGCCTTAGGCAATACTTTTGATCTTGGAGATGCTCTTGGAACTGCACAACACCATGATGCTGTCACTGGCACTGCCAAACAACACACAACTGATGACTATGCAAAACGTCTGGCTATTGGAGCCACTAAGGCTGAAGCTCTTGTTAGTTCTTCTTTGGCTTGTCTTGCCAGTAAGAAACCAGGGTCACAATGTTCAGCACCTACATCCACATTTTCCCAATGTCAATTACTTAATATCAGTTACTGCCCGCCTACAGAGGCAAATATTCCAGCAGCCAAGAATTTGGTATTAGTGGTGTATAATCCACTGGGATGGAATCGTACCGACATTATCAGAATTCCAGTTCAAGATGCAAACCTTATTGTCAAAGATTCATCCGGCAATAACGTCGTGACACAGTTCGTGGAGATCGATAATGTaaccctaaatttaagaaaattgtaCGTGAAGGCTTATTTAGGACTATCACCAAAAGAAGCCCCCAAATTCTGGCTTATCTTTCAGGCGTCCGTGCCTCCACTTGGGTGGAGTACATACTTCATTTCTAAATCTTCAGCAAAAAATAGAAGAAATGGAATTCTCTCATCTAGCAGCAACCCCAAGAGTGAGAACATAGAAATAGGACCAGGAAATTTGAAATTGTCCTTTTCTTCAACCTCTGGACAACTTAAACGGATGTATAATTCCAGAACTGGAGTTGATGTCCCAGTACAACAAAGCTATCTCTGGTATGGTTCTAGCTCTGATCAAGGTCAGGCATCTGGTGCATACATATTCCGCCCTGATGGGGCCCGTCCAACCATTGTTTCAAGATCAGTGCCTATCAAGGTTATCCGTGGAACAGTAGTACATGAGGTTCACCAGCAGTTTAGTTCCTGGATTAACCAGgtTACAAGGCTGTACAAAGACAAAGAGCATGCTGAAATTGAATACACCatTGGTCCAATTCCTACCGAGGATCAAGTTGGAAAGGAGGTCATCACACAAATGACAGCAAACATGGTCACAAACAAGGACTTTTATACTGATTCTAATGGAAGAGATTTTCTGAAAAGGATTCGCGATTTCAGGGAAGATTGGCCTCTTCAAGTTACTCAACCTGTAGCAGGAAACTATTATCCAATCAATCTTGGAATTTATACTAAGGATAAGAAAACTGAATTCTCAGTCTTAGTTGATCGTGCTGCTGGTGGAGCTAGCATCCATGATGGCGAGGTGGAGTTAATGCTTCATAGGCGCATCCTCTTTGATGATGGTAGAGGAGTAGGTGAAGCACTTGATGAACAAGTTTGCATAAATGACACATGCCAAGGACTAACAGTCAGAGGAAATTATTACATAAGCATCGACAAGGTTGGAGCAGGTGCACGCTGGCGCCGTACAACTGGCCAAGAAATTTACTCGCCATTTCTACTGGCTTTTGCACATGATACCTTGGAAAACTGGAAGTCCTCATATTTCACAGAAGGAACTGTCATGGATCCAAATTACAGCTTGCCTAAAAATGTTGCTTTGATAACCCTTCAGGAGTTGGATGATGGATCTGTGATTCTCCGATTGGCACATCTATATGAGCCAAGTGAAGATGCTGAGTATTCAACTCTGAGCAAAGTTGAACTGAAGAAGCTGTTTGCCAACAAAACGAtaaaggagttgaaggagaTGAGTCTATCTACGAATCAAGAGAAGTCAGAGATAAAGAAGTTGAGTTGGAAAGTTGAAGGGGACAAAGGCCAAGAGGCTGAGGCAGTAAGGGGTGGCCCTGTGAAGATGTCTGATCTAATTGTTGAGCTTGGTCCCATGGAAATACGCACTTTCTTGTTGAAATTTTAA 3015 0.4242 MGMRAALLASHILLLCFYGSLVCAKYNRYNTASGIVEGKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVENVLDSLLMSLPRDPNRKFVYAEMAFFHRWWVEQSPETQEQMTKLVNAGQLEFVNGGWCMHDEATCHYIDMIDQTTLGHRFIKDQFNKVPRAGWQIDPFGHSAIQAYLLGAELGFDSVHFARIDYQDRAVRKNNKTLEVVWRGSNTFGSSAQIFANAFPVHYSPPTGFHFEVDDDYVPVQDDPLLFDYNVEQRVNDFIDAAITQANVTRTNHIMWTMGDDFMYQNAETWFKQMDKLIHYVNKDGRVNALYSTPSLYTDAKNAAKQSWPLKTDDYFPYADGADSYWTGFFTSRPALKRYVRMLSGYYLAARQLEFFVGKKPALGNTFDLGDALGTAQHHDAVTGTAKQHTTDDYAKRLAIGATKAEALVSSSLACLASKKPGSQCSAPTSTFSQCQLLNISYCPPTEANIPAAKNLVLVVYNPLGWNRTDIIRIPVQDANLIVKDSSGNNVVTQFVEIDNVTLNLRKLYVKAYLGLSPKEAPKFWLIFQASVPPLGWSTYFISKSSAKNRRNGILSSSSNPKSENIEIGPGNLKLSFSSTSGQLKRMYNSRTGVDVPVQQSYLWYGSSSDQGQASGAYIFRPDGARPTIVSRSVPIKVIRGTVVHEVHQQFSSWINQVTRLYKDKEHAEIEYTIGPIPTEDQVGKEVITQMTANMVTNKDFYTDSNGRDFLKRIRDFREDWPLQVTQPVAGNYYPINLGIYTKDKKTEFSVLVDRAAGGASIHDGEVELMLHRRILFDDGRGVGEALDEQVCINDTCQGLTVRGNYYISIDKVGAGARWRRTTGQEIYSPFLLAFAHDTLENWKSSYFTEGTVMDPNYSLPKNVALITLQELDDGSVILRLAHLYEPSEDAEYSTLSKVELKKLFANKTIKELKEMSLSTNQEKSEIKKLSWKVEGDKGQEAEAVRGGPVKMSDLIVELGPMEIRTFLLKF 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3941 1004 SMART Alpha_mann_mid_2 357 431 IPR015341 GO:0004559|GO:0006013
Sto6g3941 1004 SUPERFAMILY Galactose mutarotase-like 462 1004 IPR011013 GO:0003824|GO:0005975|GO:0030246
Sto6g3941 1004 Gene3D - 467 578 IPR013780 -
Sto6g3941 1004 SUPERFAMILY Glycoside hydrolase/deacetylase 29 354 IPR011330 GO:0005975
Sto6g3941 1004 Pfam Alpha mannosidase middle domain 357 449 IPR015341 GO:0004559|GO:0006013
Sto6g3941 1004 Gene3D Glycoside hydrolase 38, N terminal domain 40 320 IPR027291 -
Sto6g3941 1004 Gene3D Glycoside hydrolase family 38, central domain 321 398 IPR037094 GO:0004559|GO:0006013
Sto6g3941 1004 Gene3D - 886 1004 - -
Sto6g3941 1004 Gene3D - 598 862 - -
Sto6g3941 1004 Pfam Glycosyl hydrolases family 38 C-terminal domain 602 814 IPR011682 GO:0004559|GO:0006013
Sto6g3941 1004 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 896 1001 IPR041147 -
Sto6g3941 1004 Pfam Glycosyl hydrolases family 38 N-terminal domain 41 352 IPR000602 GO:0004559|GO:0006013
Sto6g3941 1004 PANTHER ALPHA-MANNOSIDASE 11 1004 - -
Sto6g3941 1004 Gene3D Glycoside hydrolase family 38, central domain 399 454 IPR037094 GO:0004559|GO:0006013
Sto6g3941 1004 PANTHER ALPHA-MANNOSIDASE 11 1004 - -
Sto6g3941 1004 CDD GH38N_AMII_LAM_like 40 316 - -
Sto6g3941 1004 SUPERFAMILY Families 57/38 glycoside transferase middle domain 357 456 IPR028995 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3941 Sto-Chr6 43520260 43526405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3941 3 951 Glycoside Hydrolase AT3G26720 59.391 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3941 K01191 - gmx:100775419 1655.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3941 6 43520260 43526405 Sto6g3941 6 43520260 43526405 ECH