Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3935 ATGGCTTCTGCTGTGACTGCTTCCGTCTCCTTCCCATCCTCCAAGTCCACCTCTCTCTCAACCAGAACCTCCATCGTTGCCCCTGACAGACTAGTACCCAAGAAGttgcAGGTTGCATTGCAATACAGGGATGTTTGCAGCAGTGGGAGAGTAGTTTCCATCAGAGCTCAAGTGACGACCACAGAGACAGCTGCACCTGCTGCAAAGGTAGAGAAGGAATCGAAGAAACAGGAAGAAGGAGTTGTTGTGAACAAGTTCAAACCCAAGAATCCTTACACTGGAAGATGCTTGCTCAACACTAAGATCACTGGGGATGATGCTCCTGGAGAGACTTGGCACATGGTCTTCAGCACCGAGgGAGAGGTTCCCTACAGAGAGGGACAGTCAATTGGAGTGATCGCCGATGGTGTTGACAAGAATGGCAAGCCTCACAAGCTCAGACTCTATTCTATTGCCAGCAGTGCCCTCGGTGACTTTGGTGACTCCAAAACCGTTTCTCTGTGTGTGAAACGGCTTGTGTACACTAACGAGAATGGAGAACTTGTGAAGGGAGTGTGTTCTAACTTCTTGTGTGACTTGAAGCCTGGAGCTGAAGTGGCAATCACAGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTTATCATGTTGGCAACTGGAACTGGAATCGCTCCATTCCGCTCATTCTTATGGAAAATGTTCTTTGAGAAGCACGATGATTACAAATTCAATGGTTTGGCATGGCTCTTCTTGGGTGTTCCCACAAGCAGCTCACTGCTTTACAAGGAGGAATTTGAAAAGATGAAGGAGAAAGCACCTGACAACTTCAGGCTTGACTTTGCAGTGAGCAGAGAGCAGACAAACgagaaaggagagaagatgtaCATCCAAACCCGAATGGCTCAATATGCAGAAGAGTTATGGGAGTTGCTCAAGAAGGATAATACCTTTGTCTACATGTGTGGACTCAAAGGGATGGAAAAGGGAATTGATGACATCATGGTCTCTTTGGCTGCCAAAGATGGCATTGATTGGATGGAGTACAAGAAACAATTGAAGAAAGCAGAGCAATGGAATGTGGAAGTCTACTAA 1107 0.4571 MASAVTASVSFPSSKSTSLSTRTSIVAPDRLVPKKLQVALQYRDVCSSGRVVSIRAQVTTTETAAPAAKVEKESKKQEEGVVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGAEVAITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWMEYKKQLKKAEQWNVEVY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3935 368 SUPERFAMILY Riboflavin synthase domain-like 70 212 IPR017938 -
Sto6g3935 368 PIRSF Frd-NADP+_RD 1 368 IPR015701 GO:0016491
Sto6g3935 368 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 209 368 IPR039261 -
Sto6g3935 368 PANTHER - 1 368 IPR015701 GO:0016491
Sto6g3935 368 Gene3D Translation factors 58 205 - -
Sto6g3935 368 Pfam Oxidoreductase NAD-binding domain 221 335 IPR001433 GO:0016491
Sto6g3935 368 PIRSF FNR-PetH 2 368 IPR035442 GO:0016491
Sto6g3935 368 Gene3D - 206 368 IPR039261 -
Sto6g3935 368 CDD CYPOR_like_FNR 84 368 - -
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 124 134 IPR001709 GO:0016491
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 147 154 IPR001709 GO:0016491
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 184 193 IPR001709 GO:0016491
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 220 239 IPR001709 GO:0016491
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 250 259 IPR001709 GO:0016491
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 262 273 IPR001709 GO:0016491
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 298 314 IPR001709 GO:0016491
Sto6g3935 368 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 322 330 IPR001709 GO:0016491
Sto6g3935 368 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 89 211 IPR017927 GO:0016491
Sto6g3935 368 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 368 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3935 K02641 - gmx:100802032 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3935 6 43471924 43474074 Sto6g3935 6 43471924 43474074 ECH