Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3905 ATGACACAAAAATGGGAGCTCGTCGTCGCGTTATCTCTGCTACTCTTTCTATCGTCCCCGACCTACTCTTTCGGATTTTCGGCACCTCGTTCGCTTCTTAATCACGTATCTCCAACCGCCAAATATCTCACCAATCAGGAGCTATGGTTCAATCAGACCCTCGACCACTTCTCTCCCTATGACCACCGTCATTTCCAGCAGCGGTACTATGAGTTTCTTGACTATTTCCGAATACCTGATGGACCAATTTTTATGGTCATCTGCGGTGAATATTCGTGCAATGGGATATCAAATGACTATATAAGTTTGCTTGCAAAGAAGTTTGGAGCAGCCGTGGTTTCTCTTGAGCATCGCTATTATGGAAAGAGTTCTCCATTTAAATCTCTATCAACTGAAAATTTGAGATATCTTTCATCCAAGCAGGCACTCTTTGATTTGGCTGTTTTTCGCCAGTATTATCAGAACTCCTTAAATGTGAAGCTAAATAGAACAAAAGGTGAAAACCCATGGTTTGTCTTTGGTATCTCATATCCTGGAGCACTTAGCGCATGGTTCCGTCTCAAGTTTCCCCATTTAACTTGTGGAAGCCTTGCAAGTTCTGCAGTTGTTCATGCAGTTTATAACTACACAGAATTTGATCAGCAGGTTGGTGAGTCAGCAGGCACTGAATGTAAAGCGGCATTACAAGAAACTACAAAACTCATTGAACAAAGACTTGCAGTTAATGGAAGGAAGCTGAAGACACTATTTAATGCAGCTGAGCTAGAAATTGATGGTGACTTCATGTATTTGCTGGCAGATGCTGCTGCTGTAGCGTTTCAATATGGAAATCCAGATAGATTATGCAAACCGCTTGTTGAAGCAAAGAAAGCTGAAGAGGATTTAGTGAATGCTTATGCAAAATATGTTAAAGAGTATTATCTTGGAACTTTTGGTGTTGATGTTCAAACCTATAACCAGAAGCATCTGAAAAATACTGCTATTAGTGAAGACAGTTCTGATCGATTGTGGTGGTTTCAAGTTTGCACTGAAGTTGCATACTTTCAGGTGGCTCCTGCAGATGACAGTGTACGTTCCTCAAAAGTTGACACAAGATATCATTTGGACCTTTGCAAAAATGTCTTTGGAGAGGGCATCTTTCCTGATGTTACTGCAACTAATATATACTATGGAGGAACAAAAATTGCTGGTTCAAAAATAATCTTTACGAATGGCTCCCAGGATCCTTGGCGTCATGCATCCAAACAAACTTCAAGTCCTGATATGCCTTCCTATACTATATCGTGTTATAATTGTGGCCATGGAACTGATATGCGAGGATGTCCTCAATCACCTCTGAACCTCGAAgGTAATGCGAAGAATTGCACAAATCCTGATGCGGTTAGCAAAGTGAGGCAAAAGATCACAGAGCATATCGACTTGTGGCTATCCGAGTGTCTGGAATCTGAAAGGAGCTTTATGTAA 1464 0.4105 MTQKWELVVALSLLLFLSSPTYSFGFSAPRSLLNHVSPTAKYLTNQELWFNQTLDHFSPYDHRHFQQRYYEFLDYFRIPDGPIFMVICGEYSCNGISNDYISLLAKKFGAAVVSLEHRYYGKSSPFKSLSTENLRYLSSKQALFDLAVFRQYYQNSLNVKLNRTKGENPWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVHAVYNYTEFDQQVGESAGTECKAALQETTKLIEQRLAVNGRKLKTLFNAAELEIDGDFMYLLADAAAVAFQYGNPDRLCKPLVEAKKAEEDLVNAYAKYVKEYYLGTFGVDVQTYNQKHLKNTAISEDSSDRLWWFQVCTEVAYFQVAPADDSVRSSKVDTRYHLDLCKNVFGEGIFPDVTATNIYYGGTKIAGSKIIFTNGSQDPWRHASKQTSSPDMPSYTISCYNCGHGTDMRGCPQSPLNLEGNAKNCTNPDAVSKVRQKITEHIDLWLSECLESERSFM 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3905 487 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 16 482 - -
Sto6g3905 487 Pfam Serine carboxypeptidase S28 52 441 IPR008758 GO:0006508|GO:0008236
Sto6g3905 487 Gene3D alpha/beta hydrolase 43 310 IPR029058 -
Sto6g3905 487 Gene3D alpha/beta hydrolase 312 480 IPR029058 -
Sto6g3905 487 PANTHER SERINE PROTEASE EDA2-RELATED 16 482 - -
Sto6g3905 487 SUPERFAMILY alpha/beta-Hydrolases 73 277 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3905 Sto-Chr6 43277672 43282233 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3905 - - qsu:112033600 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3905 6 43277672 43282233 Sto6g3905 6 43277672 43282233 ECH