LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto6g3892	ATGGAGCTCATGGCGGACATTGTTGCAGCAGCTCCATGGGTGCCGGAAGATGACCTGCGCTTGAAGAACGCTGTCGAGGCGGGTGCTTCTTTGGAATCACTTGCCAAAGGAGCTGTTCGATTCTCCCGCAAATATACGCTTACGGAATTGCGAGATCGATGGCAGTCTCTCCTGTATGATCCTGATATTTCAGCTAAGGCTTCTTCTTCTATGATTAAATTAGAGCAACCAGCGCCCACTGTACCTTCCAAGTCCAGCGGGAGTGTAACTACTGCCAAGAGAAAAGTTCAAAGTATTCGCAGGCAGTATAATGCCTTGCGCAAAAGACTTTGCAGGGAAATGATCGACTCTTTTGACAGGGCTTTGCATGATGAAATGAATATAGTTGATGATACTGGAGATGGAGGTGTGTGTGAGAAGGATATAATCGTGTATGATGAGTCTCTTGCAGGGCACTGTCTGAAGGGCAATCAGGTTGAAATGAAGTTTGGTTTTCAGGAGACAGGTATTGTATCGGAAAAAAATGACAATAGAAGTTCTTCACTACAGGATAATGTGATTGTGAAGAAGGATATGAATAACTTAATTGTGGATAATTTAGTTGATTATAGGAATTGCTCAGGGCTAGAGGAAGTAGGAGCATCTCATTCATTGCCTGATGCGCCTCTTTGGAAAACAATTGAGGATGTCACTGCACCTACTATGCCTGTCCATGTGAGCCTAGAAAATAAAGGCCACCGTACAGAAGAGCAATTAATGCTTCCTGATCATATGAAAGGCAAGCATGCTAGTGATGTGTTAGATGTACCTAATGTTATCTCCAGAGAAGATATTGCACACCTTTCAGACTCTCTCTTAAACTTCACAAATGACGATGAGCTTCTCTTTATGGATATAGATGGGAAAGATGCACCAGATAAGTCTTGTTATGACAACCTTGATTCACTTCTGTTGAATTCTCCCAGCGAAATTCAGGGCAATGATGTGCCTGATGTTCGTGAATCTCAGAAGCCAAATAAAGAAACAAAACTTCCTATGCCTAGTGATTCATCTGCTAATGGGTCAGAGGTTATTGCCAACTCATTAAACTGCAGTGGTGGCGACCTTCATTCTATTTCTAATCCTAGCAAGGATATCCAATCAGCTGTAGCAGAGCAAAGTCTTAACTGTGCTGACCATGGTAATGAATTTACGTATTGTGTATTGAACACTGAGGACCCTGACGTCCCATCCAATGATGATATAGGCTCAACCATCATAGTTCCATCTTCTGCGACTCAACCAACATATAAGGAGGCTGGCTTTCCAGTTTCTTCTTCTAACAACCAAAGAAATATAGAACCAGAGATGAGCTTGAAGAAAGAAGGCAAGCCTTCACACACCTTCACAACTTCACAGATGATAAGACCAGAGTTGGTGGCTACCATAAATTCAAACCAACCGCCTGCTGGTGTTGCAATAAAAACTGAAATAATTGGCAGGAACCTTTTTTCTGCAGTTTCTAGACAGGGTCACTCTGCCAATGTCAATCCAAGTCAAACCAGATTAGATCATGCAGGCATGAAATCTGCTGCAGATGGACGTCTGAAAGAAGAGGAAATTGATGCTTCAGCTTCATCTAAAGTTTATGCGCATTCAAAGGCAGATAAACATAATGATTTTCCCAAAACAGAAACAAATCCATTAATAAGAGAtcaggaaaaagaagaagatgatgatgatgatggtgatgatgaggaTGACAGCGACATTCCTTACTTTTCTGATATTGAGGCAATGATTCTTCAGATGGATTTATGTCCAACTGATCAAGATTCAAATGCAAAAAGAGAAGTCTCTAGGTATCAACATGAAGATTCTAAGAGGACCATCATGAGATTGGAACAATGTGCTCACTCCTTTGTGCAAAGAGCCATTGCATCACGAGGTGCACTTGCTGTGTTGTATGGACGCAATCTCGAGCAATATATCAAGAAAAGCGAGGTTATACTTGGCAGAGCAACAGATGATATAAAAGTTGATATTGACTTGGGAAGAGAAGGGCGCGCTAACAAAATATCTAGACGACAAGCACTAATAAGGATGGAAGCAAATGgttcttttattataaaaaatattggcAAAAGTTCAGTCTTCGTGAATGGCAAGGAAGTTGTCACTGGACAGATGCGGGGTCTTAGTTCTAAATGTCTGATTCAGATTAGAGATATGGCGTTCATCTTTGAGATCAATAACAAATGCGTGAGGATGTATTTGGACAATGTGGATAAGAAAAGCAATgacattaataaatttaatgttaCCTGA	2307	0.3988	MELMADIVAAAPWVPEDDLRLKNAVEAGASLESLAKGAVRFSRKYTLTELRDRWQSLLYDPDISAKASSSMIKLEQPAPTVPSKSSGSVTTAKRKVQSIRRQYNALRKRLCREMIDSFDRALHDEMNIVDDTGDGGVCEKDIIVYDESLAGHCLKGNQVEMKFGFQETGIVSEKNDNRSSSLQDNVIVKKDMNNLIVDNLVDYRNCSGLEEVGASHSLPDAPLWKTIEDVTAPTMPVHVSLENKGHRTEEQLMLPDHMKGKHASDVLDVPNVISREDIAHLSDSLLNFTNDDELLFMDIDGKDAPDKSCYDNLDSLLLNSPSEIQGNDVPDVRESQKPNKETKLPMPSDSSANGSEVIANSLNCSGGDLHSISNPSKDIQSAVAEQSLNCADHGNEFTYCVLNTEDPDVPSNDDIGSTIIVPSSATQPTYKEAGFPVSSSNNQRNIEPEMSLKKEGKPSHTFTTSQMIRPELVATINSNQPPAGVAIKTEIIGRNLFSAVSRQGHSANVNPSQTRLDHAGMKSAADGRLKEEEIDASASSKVYAHSKADKHNDFPKTETNPLIRDQEKEEDDDDDGDDEDDSDIPYFSDIEAMILQMDLCPTDQDSNAKREVSRYQHEDSKRTIMRLEQCAHSFVQRAIASRGALAVLYGRNLEQYIKKSEVILGRATDDIKVDIDLGREGRANKISRRQALIRMEANGSFIIKNIGKSSVFVNGKEVVTGQMRGLSSKCLIQIRDMAFIFEINNKCVRMYLDNVDKKSNDINKFNVT	768

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto6g3892	768	Coils	Coil	89	109	-	-
	Sto6g3892	768	MobiDBLite	consensus disorder prediction	503	517	-	-
	Sto6g3892	768	ProSiteProfiles	Forkhead-associated (FHA) domain profile.	662	718	IPR000253	GO:0005515
	Sto6g3892	768	MobiDBLite	consensus disorder prediction	521	566	-	-
	Sto6g3892	768	Gene3D	-	600	753	-	-
	Sto6g3892	768	PANTHER	FHA DOMAIN PROTEIN	4	760	-	-
	Sto6g3892	768	MobiDBLite	consensus disorder prediction	503	584	-	-
	Sto6g3892	768	MobiDBLite	consensus disorder prediction	341	359	-	-
	Sto6g3892	768	Pfam	FHA domain	662	734	IPR000253	GO:0005515
	Sto6g3892	768	MobiDBLite	consensus disorder prediction	567	584	-	-
	Sto6g3892	768	MobiDBLite	consensus disorder prediction	320	359	-	-
	Sto6g3892	768	SUPERFAMILY	SMAD/FHA domain	653	748	IPR008984	GO:0005515
	Sto6g3892	768	Pfam	N-terminal region of micro-spherule protein	13	76	IPR025999	-
	Sto6g3892	768	SMART	FHA_2	661	718	IPR000253	GO:0005515
	Sto6g3892	768	MobiDBLite	consensus disorder prediction	74	93	-	-
	Sto6g3892	768	CDD	FHA	658	745	IPR000253	GO:0005515
	Sto6g3892	768	PANTHER	MICROSPHERULE PROTEIN 1	4	760	IPR037912	GO:0002151\|GO:0031011\|GO:0071339

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto6g3892	Sto-Chr6	43205083	43209606	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto6g3892	-		-	lang:109333160	696.041

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto6g3892	6	43205083	43209606	Sto6g3892	6	43205083	43209606	ECH