Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3871 ATGAGTGAAGTGAATCACCAAAGAATCAAAACCAACGGGATATGGATGCACATAGCAGAACAAGGAAAAGGGCCACTTGTTCTGCTGCTTCACGGCTTCCCGGAAATATGGTATGCTTGGCGCCACCAGCTCAACTTCTTGGCAAACCATGGTTACCATGCAGTTGCTCCTGACTTGAGAGGCTACGGTGATTCTGACTCTCCTCTCAACCCCTCTTCCTACACCTTTTCCCACATCGTTGGCGATCTTATAGGCCTTCTGGACCATCTTGGAGAACCCCAGGCATTTGTAGTTGGAAGTGATTGGGGAGCACAGATTGGATGGCATCTGAGCCTCTTTAGGCCAGACAGAGTGAAGGGGTTTGTGGCTCTCTCTGTTCCTTACTATCCAAGATCTCCAAATATCAAAACAGTAGAATCTATCGTACAGATATTTGGGGAGCAGGTTCATGTTTCCCAGTTCCAGAAAGCAGGGAGAGCAGAAAGAGCTTTTGCCAGATACGATTGTTTGACAGTGATGAAGAAGATGTTGCTGACAAAAGCAGACATTCTGACATCTCCTCCGGGCATGGAACTTATTGATTACTTGCCAACGCCTTCCTATCTGCCTTCATGGATAACGGAAGAGGAACTCACCGTTTTTGCTGACAAGTTTCAGGAATCTGGTTTCACTGGTCCACTCAATTACTACCGTGCAATGAACCTGTAA 708 0.4675 MSEVNHQRIKTNGIWMHIAEQGKGPLVLLLHGFPEIWYAWRHQLNFLANHGYHAVAPDLRGYGDSDSPLNPSSYTFSHIVGDLIGLLDHLGEPQAFVVGSDWGAQIGWHLSLFRPDRVKGFVALSVPYYPRSPNIKTVESIVQIFGEQVHVSQFQKAGRAERAFARYDCLTVMKKMLLTKADILTSPPGMELIDYLPTPSYLPSWITEEELTVFADKFQESGFTGPLNYYRAMNL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3871 235 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Sto6g3871 235 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Sto6g3871 235 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Sto6g3871 235 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Sto6g3871 235 Pfam alpha/beta hydrolase fold 25 136 IPR000073 -
Sto6g3871 235 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 1 235 - -
Sto6g3871 235 Gene3D alpha/beta hydrolase 1 235 IPR029058 -
Sto6g3871 235 SUPERFAMILY alpha/beta-Hydrolases 3 234 IPR029058 -
Sto6g3871 235 PANTHER EPOXIDE HYDROLASE 1 235 - -
Sto6g3871 235 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Sto6g3871 235 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Sto6g3871 235 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3871 Sto-Chr6 43088131 43089070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3871 2 235 Acyl Lipid Metabolism Gene Families AT3G51000 64.557 8.99e-115 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3871 - - gmx:100818894 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3871 6 43088131 43089070 Sto6g3871 6 43088131 43089070 ECH