Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3869 ATGAGGTTTTCGCGATTCATAAAGTTTTCACATCTCCGCAAAGCCCTGTGTCAAAACCCTAGCTTCAATCCTCCATCAATTTCAAGACAAGTTTTCTTGCCCGATCGCCATTCAAGATTCCAGTGTTCTTCTGGCTTCACGCGCTATTACTCTACCCCTGCACAAGATTCAAAACCTGTCCAATCCGAGAAGGTTTCGGCCATTGTGGACGAGCTCATGGGCCTCACGCTGCTTGAAGTCATGGACCTTGTCGAAGTTATGCGCGAGAAAAAGGGCGTAAATGAGCTTCCGCTTATGATGGTAATGATGCCCGGAATGGGAGTCGGCGGCTTGAAGGGTGCGCCAAAGGGTGCTCcaaaaggagaagaaaagaaGGCTGAAAAGACGGCTTTTGATGTGAAGCTCGAAGCCTTTGATGCCGCTGCAAAGATCAAGGTCATTAAGGAAGTGAGGACGTTTACCAGTTTGGGTTTGAAGGAGGCCAAGGATTTAGTGGAGAAGGTGCCGACCCTTTTGAAGAAAGGTGTAACCAAAGAGGAAGCAGAGACCATTATTGCCAAGATGAAGGAGGTTGGCGCCAAAGTATCAATGGAATAA 597 0.4673 MRFSRFIKFSHLRKALCQNPSFNPPSISRQVFLPDRHSRFQCSSGFTRYYSTPAQDSKPVQSEKVSAIVDELMGLTLLEVMDLVEVMREKKGVNELPLMMVMMPGMGVGGLKGAPKGAPKGEEKKAEKTAFDVKLEAFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPTLLKKGVTKEEAETIIAKMKEVGAKVSME 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3869 198 Hamap 50S ribosomal protein L7/L12 [rplL]. 62 198 IPR000206 GO:0003735|GO:0005840|GO:0006412
Sto6g3869 198 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 64 133 IPR036235 GO:0003735|GO:0005840|GO:0006412
Sto6g3869 198 CDD Ribosomal_L7_L12 63 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
Sto6g3869 198 Gene3D Single helix bin 64 127 IPR036235 GO:0003735|GO:0005840|GO:0006412
Sto6g3869 198 SUPERFAMILY ClpS-like 127 197 IPR014719 -
Sto6g3869 198 Pfam Ribosomal protein L7/L12 dimerisation domain 64 107 IPR008932 GO:0003735|GO:0005840|GO:0006412
Sto6g3869 198 Pfam Ribosomal protein L7/L12 C-terminal domain 131 197 IPR013823 GO:0003735|GO:0006412
Sto6g3869 198 Gene3D - 128 197 IPR014719 -
Sto6g3869 198 PANTHER 39S RIBOSOMAL PROTEIN L12 47 198 IPR000206 GO:0003735|GO:0005840|GO:0006412
Sto6g3869 198 TIGRFAM L12: ribosomal protein bL12 66 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3869 Sto-Chr6 43076192 43076788 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3869 K02935 - csv:101204400 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3869 6 43076192 43076788 Sto6g3869 6 43076192 43076788 ECH