Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3867 ATGAGTATGTTGAACCTCAAAGAAATGCCGATGGCGGCGTCCACCCTGTTCTCCGCTTACGCTTCCTTGTCTGCTTCAATGATGCTTCTTCGTTCCATGGCCAATGAGCTCATACCCACCCCTATTAGATCCTACCTCTACTCTACCCTCCGCTCCTTCTTCACCCCTCTCTCTTCCGATCTCACTCTCATCATTGACGAATTCTCCGGCATCGCCCACAACCAGCTCTACGACGCCCTTCAACTCTACCTCCGCACCAAGATCAGCCCCTCCACCAATAAGCGCCTCCACGTCAGCAGAACCCACCGTCAGAAAGCCCTCGCCCTCACCATCGAAAAGGACGAAGAAATCCACGATCACTTCCAAGGCATTCTCCTCAAATGGCGATTCCTCTGCGTCGACAAGtccaacaacaacaaccaacACTATTCCACCGAGAAGCGCTCTTTCGAGCTCTCCTTCCACACCAATTTCAAGGACACTGTTATGGATTCTTACTTGCCCTATGTTCTCCTCAGAGCCGACCAAATCAGAGACGAAGAGAAGGTCCTCAAGATCTATAGTCTCAATTGCCCCCGCGATTCCGATGATGAAGGGCGTAGGAATCCAGGTGGGGGTTCTTGGGGTTCCATTGTGTTGGACCATCCAGCCACGTTTGATACCTTGGCCCTTGATCCCGACCTCAAGAAGGCCATCATTGATGATTTGGATCGCTTTGTGCGAAGAAAAGACTTCTATAGAAGAGTAGGGAAGGCGTGGAAAAGAGGGTATCTGCTCTATGGTCCTCCTGGTACCGGCAAATCTAGTTTGGTAGCCGCCATGGCTAATTACCTCAACTTCAATATCTATGATCTCGAGCTTACCAGTATACGCAATAACTCCAGTCTCAGGAGTATCTTGCTCTCCACAACTAACAAATCCATTCTCGTCATTGAGGACATAGATTGTAGCGCAGAGATAAAGGATCGGCAGGCTGAAGTTAGGGAAATGAATCAGTATCGCAGAACTCCTCCTAGTGAGTTAACCTTATCGGGATTATTGAACTTCATTGATGGGTTATGGTCAAGCTGTGGAGACGAGAGAATCATAGTGTTCACCACTAACCACAAGGATAAGCTTGATCCTGCCTTACTACGTCCAGGCAGAATGGATGTCCACATCAACTTGTCTTACTGTTGTGATGAGGGGTTCAAGCTTTTGGCCTCAAATTACCTTGGCCTTCAGGACACTTGTCAGAATCCTCTGTACCACCAAGTTCAAGGTCTAATACACAACGCAAAGGTTACTCCAGCAGAGGTTGCAGAGGAATTGATGAAGAATGATGACGCCAATGTTGCTCTTGAGGGACTTGCAGGTTTTCTCAAACGGAAGACCACAGAAGTGAAAAAGGATGAAGAGGTTGATGAAGATGAGATTCAACAAGCAAAGAAGATGAAAAACACTCATAGAAAATCTGAACCTGGGTCTTTCAAAAAGGAGGCAACGAGTGCCTCAAACATGCTCAAGAGTTCTATGTCAAGAAAGGGTAGAAGAAGTAGCAAGGTCATGTCCGTGGAAATAGAGGATGTCCATGATGCTGAGGAGCACAAAGCTGTTGAGGAGTTCCGTCAAGCTCTTATATTGGACGAACTACTCCCTGCAAAGCACGATGATTATCATATGATGCTCAGATTCCTAAAGGCGAGGAAATTTGAGCTCGATAAATCAAAGCAAATGTGGTCCGACATGCTCAAATGGAGGAAGGAGTTTGGTACTGACACTATTGTGCAGGATTTTGATTTCAAGGAACACAGTGAAGTCTTGCAATATTATCCCCAAGGACATCATGGAGTAGATAAAGATGGACGACCTGTGTACATTGAGAGATTGGGCCTAGTAGATGCAAATAAGCTAATGCAAGTGACAACCATGGAACGGTACATAAAATACCATGTTCAGGAGTTTGAAAAGACATTTGATATAAAGTTCCCAGCTTGTTCAATTGCTGCAAAGAAGCACATTGATCAAAGTACAACCATTCTGGATGTGCAAGGAGTGGGGCTTAAGAGCTTTAGTAAAGCTGCCAGGGAACTTGTTACTTGCCTTCAGAAGGTTGATGGTGACAATTATCCAGagACTTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATGTTGTGGAACACCGTGAAGTCGTTCCTTGATCCTAAGACCACAGCAAAAATAAATGTTCTTGGCAACAAATATCAAAGCAAATTGCTTGAAATAATTGATGCAAGTGAGTTGCCGGAGTTTTTAGGAGGTACTTGTACCTGTGCTGATCAAGGAGGCTGTATGAATTCTGATAAGGGCCCATGGAAGGATCCAGAAATAATGAAAATGGTTCAGAATGGTGATCATAAATGCTCAAGAACAAGTCAGTCTCAGTCCGTGGAAGAGAAGACACCTTCTAAGCCTTCCGAAACGGAAACGTCTAATCTTCCACAACCGTCTCCCGCATCTCCTGCTCCCGTTAGTATTGAGGTCCCAGTTAAAATAGCTAGCAGGAAAGAGGAAATCATCCCATTGAGTGAGAAAACTGCTAGGAAAATGATAGAAGAGAAGAATAATATTGAAGCGTCTAAAGAGTTTATGACAGTGATGAAACGCATGGCTGAGTTGGAACAGAAAATGGTTACTATGAATAAACCTGCTACCTTGCCACCGGAAAAGGAGGAAATGCTGAATGCTGCTATATCCCGAGCTGATGTTTTGGAGCAAGAACTTATGGCGACAAAGAAGGCGCCATTGAATTGA 2784 0.4476 MSMLNLKEMPMAASTLFSAYASLSASMMLLRSMANELIPTPIRSYLYSTLRSFFTPLSSDLTLIIDEFSGIAHNQLYDALQLYLRTKISPSTNKRLHVSRTHRQKALALTIEKDEEIHDHFQGILLKWRFLCVDKSNNNNQHYSTEKRSFELSFHTNFKDTVMDSYLPYVLLRADQIRDEEKVLKIYSLNCPRDSDDEGRRNPGGGSWGSIVLDHPATFDTLALDPDLKKAIIDDLDRFVRRKDFYRRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLNFNIYDLELTSIRNNSSLRSILLSTTNKSILVIEDIDCSAEIKDRQAEVREMNQYRRTPPSELTLSGLLNFIDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDVHINLSYCCDEGFKLLASNYLGLQDTCQNPLYHQVQGLIHNAKVTPAEVAEELMKNDDANVALEGLAGFLKRKTTEVKKDEEVDEDEIQQAKKMKNTHRKSEPGSFKKEATSASNMLKSSMSRKGRRSSKVMSVEIEDVHDAEEHKAVEEFRQALILDELLPAKHDDYHMMLRFLKARKFELDKSKQMWSDMLKWRKEFGTDTIVQDFDFKEHSEVLQYYPQGHHGVDKDGRPVYIERLGLVDANKLMQVTTMERYIKYHVQEFEKTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFSKAARELVTCLQKVDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKINVLGNKYQSKLLEIIDASELPEFLGGTCTCADQGGCMNSDKGPWKDPEIMKMVQNGDHKCSRTSQSQSVEEKTPSKPSETETSNLPQPSPASPAPVSIEVPVKIASRKEEIIPLSEKTARKMIEEKNNIEASKEFMTVMKRMAELEQKMVTMNKPATLPPEKEEMLNAAISRADVLEQELMATKKAPLN 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3867 927 Pfam CRAL/TRIO domain 602 764 IPR001251 -
Sto6g3867 927 MobiDBLite consensus disorder prediction 795 825 - -
Sto6g3867 927 Gene3D - 211 387 IPR027417 -
Sto6g3867 927 CDD SEC14 599 765 IPR001251 -
Sto6g3867 927 Gene3D - 388 463 - -
Sto6g3867 927 CDD AAA 254 391 - -
Sto6g3867 927 SMART CRAL_TRIO_N_2 551 576 IPR011074 -
Sto6g3867 927 Pfam CRAL/TRIO, N-terminal domain 548 575 IPR011074 -
Sto6g3867 927 Coils Coil 904 924 - -
Sto6g3867 927 MobiDBLite consensus disorder prediction 475 513 - -
Sto6g3867 927 ProSitePatterns AAA-protein family signature. 361 379 IPR003960 GO:0005524|GO:0016887
Sto6g3867 927 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 596 770 IPR001251 -
Sto6g3867 927 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 862 924 - -
Sto6g3867 927 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 478 862 - -
Sto6g3867 927 Gene3D - 502 583 - -
Sto6g3867 927 Pfam ATPase family associated with various cellular activities (AAA) 258 390 IPR003959 GO:0005524|GO:0016887
Sto6g3867 927 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 862 924 - -
Sto6g3867 927 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 478 862 - -
Sto6g3867 927 SUPERFAMILY CRAL/TRIO domain 596 792 IPR036865 -
Sto6g3867 927 MobiDBLite consensus disorder prediction 794 834 - -
Sto6g3867 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 442 IPR027417 -
Sto6g3867 927 SUPERFAMILY CRAL/TRIO N-terminal domain 525 591 IPR036273 -
Sto6g3867 927 MobiDBLite consensus disorder prediction 475 490 - -
Sto6g3867 927 MobiDBLite consensus disorder prediction 491 506 - -
Sto6g3867 927 Gene3D - 584 796 IPR036865 -
Sto6g3867 927 SMART sec14_4 596 767 IPR001251 -
Sto6g3867 927 SMART AAA_5 253 393 IPR003593 -
Sto6g3867 927 Pfam Domain associated at C-terminal with AAA 38 131 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3867 Sto-Chr6 43057832 43065012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3867 530 761 Acyl Lipid Metabolism Gene Families AT5G47730 28.216 7.39e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3867 - - gmx:100527533 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3867 6 43057832 43065012 Sto6g3867 6 43057832 43065012 ECH