Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3856 ATGTTTAAGGGGCTAGATTTCGTGGTAGCTGAGGCTAGGAAGCAGGGGATCAAGCTTATACTGAGCTTGGTGAACAACTATGAGAGCTTCGGAGGGAAGAAGCAGTATGTGAATTGGGCTAGAAGTAAAGGCCACTACCTCACTTCAGATGATGATTTCTTCACAAGTCCTCTTGTTAAGGGTTATTACAAGAACCATGTCAAGACTGTTCTTAACAGATACAATAGCTTCACGGGTATTCATTACAAAGACGATCCAACAATCATGGCCTGGGAGCTTATGAACGAGCCTAGATGTACATCAGATCCTTCTGGAAGGACTATTCAGGCTTGGATTGCGGAAATGGCTTCCTTTGTGAAGTCTATGGACAGGAATCACTTATTAGAAGCTGGGTTAGAAGGATTTTATGGACAATCAACACCacagagaaagagaatgaaCCCTGGCTTTGATATAGGGACAGACTTCATAGCAAATAATCGGATCCCTGGCATTGATTTTGCGACGGTTCACTGTTATCCTGACCAGTGGTTATCCAGTTCCAATGATCAATATCAGCTTTCCTTCCTGAATAACTGGCTCAGTAGTCATTTCATAGATGCCCAATACGCTCTCCGGAAGCCAATACTTGTAGCAGAATTTGGCAAGTCATGGAAAGATGCAGGTTACAACACTTTCCAGAGAGATCAGCTTTTCAACAGTGTGTACTACAAGATATATGCTTCTGCTAAAAGGGGAGGAGCAGCAGGTGGAGCTCTTTTCTGGCAGCTTCTTACTGAAGGTATGGAGTCATTCCAAGATGGGTATGGGATAATGCTAGGCCAGAGTTCCTCCACAGCCAATGTGATCGCTCAGCAATCTCACAAGTTGTACCAAATTCGGAAGATTTTTGCAAGGATGAGGAATATGCAGAGATGGAAGAGGGCAAGAGCAAAAAGAGGTGGAAACAGAGGAAGGCATATTGGGAAATGA 972 0.4311 MFKGLDFVVAEARKQGIKLILSLVNNYESFGGKKQYVNWARSKGHYLTSDDDFFTSPLVKGYYKNHVKTVLNRYNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASFVKSMDRNHLLEAGLEGFYGQSTPQRKRMNPGFDIGTDFIANNRIPGIDFATVHCYPDQWLSSSNDQYQLSFLNNWLSSHFIDAQYALRKPILVAEFGKSWKDAGYNTFQRDQLFNSVYYKIYASAKRGGAAGGALFWQLLTEGMESFQDGYGIMLGQSSSTANVIAQQSHKLYQIRKIFARMRNMQRWKRARAKRGGNRGRHIGK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3856 323 Pfam Cellulase (glycosyl hydrolase family 5) 5 222 IPR001547 GO:0004553|GO:0071704
Sto6g3856 323 Gene3D Glycosidases 1 294 - -
Sto6g3856 323 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 1 313 - -
Sto6g3856 323 SUPERFAMILY (Trans)glycosidases 2 283 IPR017853 -
Sto6g3856 323 PANTHER - 1 313 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3856 Sto-Chr6 42999461 43000990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3856 1 321 Glycoside Hydrolase AT5G66460 69.565 8.90e-166 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3856 K19355 - pvy:116113008 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3856 6 42999461 43000990 Sto6g3856 6 42999461 43000990 ECH