Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3829 ATGGGCGACGCCTCGTTTATGGATTCGATGGACTTGAAGGTGAGTGAGCTATTGAAGGAGGTGAAGCTAGATTATTCTCCTCAATTTACCAACCTTGTAGACGACACAGTCTCCGCCATCAAAGCATCTATTGATAACATCCCTGAAGATTTTAAGCTTACGGAAGATATAGCTCCAAAATTTGTAAGGGACATTGGTGCAGATAAAGTGGAGTTCAAGTTCAAGAAGCCAAAGTCTATTAAAATAGGAGGCAGCTATCCTACACAAACTCTTGCAAAGCCTGAAGTAAATGTCGACCTTATTATTAGGTTGCCAAAGGAGTGTTTCCATGAGAAAGATTACTTAAATTACAGATACCACGCCAAGAGATGCCTGTATCTTTACTTGGTGAAGAAGTATTTGGATACTTCTCCATCTTTTGAAAAGGTTGAATGGTCCACACTACAAAATGAAGCCCGAAAACCAGTTCTAATTGTTTATCCAGCGGCAAAGCTTGTTGAAGTTCCTGGTGTTTTTATAAGAATAATTCCATCAGCAATGTCTTTATTTAGCATACAAAAGTTGAACCTGAACCGTAATAACATTCATAACTGGAATGAAGGTCTGCATCTTCAGTACTATCATTCTGCTGTTCTTTGGGCTGTTCTTGAGGCTACACCAAAGTACAATAGTAGCATTCTAGAAGACATGTTTTTAGAGGATACTgaatttattgataaaaaatttcatGGATGGAAGGAACTTAGAGAGGCTTCAATGTTGCTTAAGGTTTGGGCTCGGCAGAGAAGTTCAATATATGTTCATGATTGCCTAAATGGATGTTTAATCTCCGTCATACTGGCATATCTTTTGACAAGGCAACAAATTAACAATTCGATGAAGGCAATCCAAATAATTCGTGTTACAATGAACTTCATTGCCACTTCAGATTCGTGGAGCCGTGGGCTCTACTTTCCTCAGGAAGGCCAGAGTAGTATTTCTAAAGAGTTTGTTGTTCATAATTACCACATGCAGGAAAAGATTCAATATAATAAGTCATTTCCAGTTGTCATATGCAATCCATCTGGAAAGTTCAATTTGGCATTCCGGATGTCTAGGATTGGTTTTACACAGcTTCAAGAAGAGGCTGCTGTGACACTTAAATGCTTGGAGAAGTGTAGAGATGGTGGATTTGAGGAAATATTTATGACCAAGATTGACTGCGTTGCTAAATATGACTATTGTATGAGATTAAATTTGAAGGGAAAGAAGGAGGTATATGCGTTGGGATTTTGTTCGGATGATGAGTGCTGGAGATCTTATGAGGAGAAAGTACATAGTATTCTAACTAAAGGGTTGAGTGATAGAGCAAAGTTCATTCGTGTTACCTGGAGAAATTCGCAGTCCCATTGGAATGGTTTGTCTGTGCTTGATAAAGAACCATTATTCGTTGGAATTTCAGTGAGTACCTTGGAGAAAGCATTAAGGGTGGTTGATATTGGCCCAAATGCTGAAAATAAAGAAGAGGCTCTAGAATTTCGGAAGTTTTGGGGGGAAAAAGCTGAACTTAGGAGATTTAAAGATGGAAGAATTGCAGAAAGCACAGTTTGGGAGACTGAGCAGTGGACAAGACATCTTGTTTTAAAAAGAGTAGCTGAGCATGTACTTAGTCGACATCTCTCTTTGTCGAAAGAAAATATTATGGTTGCAGTGGATCAACTTGATTTCTCCTTGCTACAAGGAGCTGGAGATCCTATATCATATTCTGGAGGTTTGCTTGCGGCCCTTGATGTTTTATCAAAGCGCTTGCGTCTTGTTCAAGACATCCCCTTAAAGGTGTCTAGTGTACAGCCTATAGATTCAGCTTTCAGGTTTACATCAGTCTTTCCTCCTGAACCTCATCTTCTAGCTAATGAAAAAATTGAATCTTTTAGACTAAGTAAGTCCATTCCATCATGCATTCAACCACTGGAAGTTATGATTCAGATGGAAGGTTCTGGGAACTGGCCAATGGATGAACTTGcaattgaaaaaacaaaattggCATTCCTTCTTCAGATCGGACAGAGTCTTCAAAAGATGTGGGGGATGACATGTATTGCAACTGAGGATGATGTGGATGTATTAATGTCTGGATATGCGTTTCGTCTTAAAATTTTGCATGAGAGGGGCCTCACTTTGCTCAGCAGGGAAAGTGAAAATGGTCAAGCAAAGCGTGTTTCTTCTGTAGACAAGAAACTTTTCATCCGTAGTCAGCATGCTAGCATGATTAATGGATTACAAAGCCGTTACCCAATATATGGACCAGTAGTTAGACTTGCAAAACGGTGGGCTGCTTCACATCTATTTTCAGCTTGCTTGGTAGAGGAAGCAATAGAACTCTTGGTTGCATATCTCTTTCTTAATCCTTTGCCATTTGATACTCCTTGCTCACGAATCACTGGATTTTTAAGGTTCCTGCGGTTACTCTCAGAGTATGATTGGACTTTCTCGTCATTGGTTGTTGACATTAACAATGACTTAAGCCAAAGTGATCAGAAAGAAATAAGTGAGAACTTTTTGTTAAGCAGAAAGGGTCAGGGAGAGAATGGACAAAGTATAAGGCCAGCTATGTTTATAGCTACAGTTTATGATAAAGCATCTGAGGGTTGGACTGGATTATCACCGAGTGCATTGgAGCTTAAAAGGCTGGTGGCTTATGCCCGTAGTAGTGCAAACTTGTTGACGAAACTCATATATCAGGATGAGGTTGGGCCATACAGATGGCAGTGTCTTTTTCGAACTCCTTTGAACAATTATGATGCCATAATTCTGCTTCACAGAGACAAACTCCCTTATCCCCAAAGACTTCTTTTCCCATCAGAAGTTGATCATGATTTGAAGGGACGTCCGGAGGAACTTAAAAACAAGTTGCTGGTGGACTTTGATCCATTAAGGTGCTTTATCAGGGAATTGGAGGCAAATTTCTCCACCACATTCAAGGTATGGCATGATTTTCTAGGAGGTGATGTTATTGGCCTAACGTGGGGGGAAACTTATTCTACAAAGAAACGGAAGCAAGAGGAAGTAGAGGAGGAGAAAGAACACGACCCAAGGAAATTGTTAAAATCTGTGGGTGAAGTTGGTAAAGGGTTTGTGAGGAGTATTTACTTTCTCAAGCCCCCACGACTCTCGAATTAA 3159 0.396 MGDASFMDSMDLKVSELLKEVKLDYSPQFTNLVDDTVSAIKASIDNIPEDFKLTEDIAPKFVRDIGADKVEFKFKKPKSIKIGGSYPTQTLAKPEVNVDLIIRLPKECFHEKDYLNYRYHAKRCLYLYLVKKYLDTSPSFEKVEWSTLQNEARKPVLIVYPAAKLVEVPGVFIRIIPSAMSLFSIQKLNLNRNNIHNWNEGLHLQYYHSAVLWAVLEATPKYNSSILEDMFLEDTEFIDKKFHGWKELREASMLLKVWARQRSSIYVHDCLNGCLISVILAYLLTRQQINNSMKAIQIIRVTMNFIATSDSWSRGLYFPQEGQSSISKEFVVHNYHMQEKIQYNKSFPVVICNPSGKFNLAFRMSRIGFTQLQEEAAVTLKCLEKCRDGGFEEIFMTKIDCVAKYDYCMRLNLKGKKEVYALGFCSDDECWRSYEEKVHSILTKGLSDRAKFIRVTWRNSQSHWNGLSVLDKEPLFVGISVSTLEKALRVVDIGPNAENKEEALEFRKFWGEKAELRRFKDGRIAESTVWETEQWTRHLVLKRVAEHVLSRHLSLSKENIMVAVDQLDFSLLQGAGDPISYSGGLLAALDVLSKRLRLVQDIPLKVSSVQPIDSAFRFTSVFPPEPHLLANEKIESFRLSKSIPSCIQPLEVMIQMEGSGNWPMDELAIEKTKLAFLLQIGQSLQKMWGMTCIATEDDVDVLMSGYAFRLKILHERGLTLLSRESENGQAKRVSSVDKKLFIRSQHASMINGLQSRYPIYGPVVRLAKRWAASHLFSACLVEEAIELLVAYLFLNPLPFDTPCSRITGFLRFLRLLSEYDWTFSSLVVDINNDLSQSDQKEISENFLLSRKGQGENGQSIRPAMFIATVYDKASEGWTGLSPSALELKRLVAYARSSANLLTKLIYQDEVGPYRWQCLFRTPLNNYDAIILLHRDKLPYPQRLLFPSEVDHDLKGRPEELKNKLLVDFDPLRCFIRELEANFSTTFKVWHDFLGGDVIGLTWGETYSTKKRKQEEVEEEKEHDPRKLLKSVGEVGKGFVRSIYFLKPPRLSN 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3829 1052 Pfam Nrap protein PAP/OAS1-like domain 5 757 908 IPR035370 -
Sto6g3829 1052 Pfam Nrap protein PAP/OAS-like domain 248 398 IPR035367 -
Sto6g3829 1052 Pfam Nrap protein nucleotidyltransferase domain 4 585 754 IPR035369 -
Sto6g3829 1052 Pfam Nrap protein domain 3 403 554 IPR035368 -
Sto6g3829 1052 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 8 1044 IPR005554 -
Sto6g3829 1052 Pfam Nrap protein domain 6 923 1042 IPR035371 -
Sto6g3829 1052 Gene3D - 218 401 - -
Sto6g3829 1052 Pfam Nrap protein domain 1 98 234 IPR035082 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3829 K14544 - gmx:100776157 1634.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3829 6 42834016 42846646 Sto6g3829 6 42834016 42846646 ECH