Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3820 ATGTTCCTTCGAAAAAGGCAAACCCAGAATCAGAAAGAGAGAGATTCTTCTCAGGAAGATGCAAAGGTGGCTGAACTAAGGAATGCTATTGGGCCTTTATCTGGACGTAGTTTGAAGTATTGCACAGACGCATGTCTCCGTAGATACTTAGATGCACGAAACTGGAATGTTGATAAATCCAAGAAAATGCTGGAAGACACACTCAAGTGGAGGTCAACTTATAAGCCTGAAGAAATCCGTTGGCCTGAAGTGGCACATGAGGGTGAGACGGGAAAAGTCTCGAGAGCAAACTTTTATGATCGATTTGGGAGGACCGTGCTTATAATGAGACCGGGGATGCAGAACACGGCATCGccagaaaataatattaagcaTTTAGTGTACCTACTGGAAAATGCTGTCATCAATCTTCCCGAAGGTCAAGAACGTATGTCATGGTTGATAGACTTCACTGGATTTTCACTGAACTCTAATCTTTCGGTCAAAACAGCTCGTGAAGTTATCTCCATTTTACAAAATCATTATCCAGAGAGGCTTGCCATGGCTTTTCTGTATAATCCACCATCATTTTTTCAGGCTTTCTGGAAGGTTGTGAAATACGTCGTGGACCCCAGAACATCTCAAAAGGTGAAGTTTGTGTATCCTAAGAATGCGGAAAGTGTGGAGGTGATGAAATCATTCTTCGACTTGGAAAATCTTCCAAGTGAGTTTGGGGGAAAAGCAACCTTGAAGTATAATCATGAAGAGTTCTCAAGAATGATGGTAGAGGATGATGTGAAAACTGCTAAGTTCTGGGGACTTGATGAGAAGCACCTTCTTATTCAGACAGCAGCTAATTGA 840 0.4143 MFLRKRQTQNQKERDSSQEDAKVAELRNAIGPLSGRSLKYCTDACLRRYLDARNWNVDKSKKMLEDTLKWRSTYKPEEIRWPEVAHEGETGKVSRANFYDRFGRTVLIMRPGMQNTASPENNIKHLVYLLENAVINLPEGQERMSWLIDFTGFSLNSNLSVKTAREVISILQNHYPERLAMAFLYNPPSFFQAFWKVVKYVVDPRTSQKVKFVYPKNAESVEVMKSFFDLENLPSEFGGKATLKYNHEEFSRMMVEDDVKTAKFWGLDEKHLLIQTAAN 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3820 279 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 6 275 - -
Sto6g3820 279 CDD SEC14 100 240 IPR001251 -
Sto6g3820 279 SUPERFAMILY CRAL/TRIO N-terminal domain 14 82 IPR036273 -
Sto6g3820 279 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Sto6g3820 279 MobiDBLite consensus disorder prediction 7 21 - -
Sto6g3820 279 MobiDBLite consensus disorder prediction 1 21 - -
Sto6g3820 279 Gene3D - 3 273 IPR036865 -
Sto6g3820 279 Pfam CRAL/TRIO domain 99 239 IPR001251 -
Sto6g3820 279 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Sto6g3820 279 SUPERFAMILY CRAL/TRIO domain 81 260 IPR036865 -
Sto6g3820 279 PANTHER GH16843P 6 275 - -
Sto6g3820 279 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Sto6g3820 279 SMART sec14_4 87 242 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3820 Sto-Chr6 42789911 42792096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3820 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 25.490 2.37e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3820 - - zju:107424593 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3820 6 42789911 42792096 Sto6g3820 6 42789911 42792096 ECH
Sto6g3820 6 42789911 42792096 Sto11g1550 11 14660286 14662081 ECH