Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3809 ATGAGATATAGGATTTCCTATTTGATGGATGAGATCTGGGAGAGGGCCGTGGAGACAGCTTTAGACGGCGAGACGGACCACGCCTCGGCTCGAACCCTAACCCTTGACGGAGCAGTAAAGTGCGTCCAAGGTCGGTTGCCGCCTCCGAGCCTATTAGAGAGATTCCAGAACCTTCAGCACCTTTCTATTGCCAATATAGGCGTTTCGTCGCTTGAGCAGTTCCCGAGGCTTCGAAATCTTCAGAAGTTAATCCTTTCCGACAATCGGATTGCTGGGGGCCTCGAATTCCTTGTGCAAGCGGGGCTTGATTCCCTGCGAGACCTCGATCTTTCCAATAATCGGATTCAATACATTGAGGATCTTGCGCCACTTGCGCAGCTGAAGCTTGTTTCACTGGATCTGTACGAGTGTCCTGTCACGAGGGTCAAGGATTATCGATCTAGGGTTTTTGGGCTGATTAAATCGCTTAAGTACTTGGATAAGATGGATGCGGAGGAGAACGAAAGGCCAGAgtctgatgatgaggatgaggaGGATGAGGAGGAAGAGGATGACCCAGGGAGTGGAGAAATTGATGGCGAGGATCGTCCTTTTGGAATGACCAACGGGCATAGCGAGGGGGTGGATGGGGTTGTGGATGCTGATGAGGATGAAGAGAGTGATGCTGATGAGGAGGAGACCGAAACCTCAAGGAGGGCAAATGGCCTGAGTCATCAAGCTAATGAGCCAGAGAGTACTGGAAGATTGACTAGCACAGAGGGGGAAATTGATGGCCATGAACAGGGAGAGGATGTTGGAGATGAAGATGATAATGGAGAGACTGGTGAAGACGAGGTAGGGGTAGAAGATGATGGAGAGTTtgaagacgatgatgaaGAAGAAGACTATGGTGCAGGATATCTTGTTCAGCCTGTAGCACAGTCTGAAGCAGTTACTGCTGGGAGGGGTGGCCTTGATGGGGGAAATGATAATggtgaggaagaggaagaagttgATGACGATGAGGGTGAGGACGAGGAAGaagttgatgatgatgaagacgaTGTTCAGGTGGTGCCTCCTCCTTCTTCAAATCACAAGAGGAAgagggatgatgatgatgatgatgatgatggagatgaggatgaggatgatgatGGCGAGAAGAACGACGATGACGATGATGTGGTATCATACACAAAGTCAGGTCTTCTCAGTTCTCACTTCCGTCTTCCTGCCTATGCCCGTCGCTTAGCGTTTACTTTGAAGACTCAACGATTTCTTAGCCTTGTTAACCACGCTTTCCTCATCGCCTTCTCTCCGTTTCTTCCGTTCAACCCCAGATCGTTACAGAAATCTGGAAAGGCACGTGCAACAAAAGAATCTTGGAAATCTGCACTTGCACATTTTAACCCTCCAGTGAAGGAAAAATTGAGCATTGGAGATGCAGTGAAGGATCTCGTTCTTCCTTTCCTTCCCGCCAAATCACTATGCAGGTTCAAATCTGTGAGTAAAAAATGGAACCAATGGATTAAGAATCCTTTCTTCATCCACAGCCAAAGCTACTATTGCAGAACCACATGTGGCTTCTTCTATCAGCCGCCGTATGGAATCCCTATCTTCATATCACTGAATCCACGTGCTTATGGCGTTGCAAGCCCCCTTTTCACTTTCGTCGCCGAAATTCTCGATGTAAGGAGCTCTTGCAACGGTCTGATTTGCGGCAAAAATGGCTTTGGAGATCCTAATTACTACATCTGCAACCCTGTGAACAAGCAAGGCCTATGTCTTCCCAAGTCAAATCTCTATCATGGACCTCAATCGGCTCCAGTGCTTGCCTTTGAACCTTCACTTTTCAACTTTTCCGCAAATTATGAGCTCATTTGCGCCATTCCTTCCCTCGATGATGAACCTGTGATTCGCTTTGAGATTTTCTCTTCCAGATCTTGGACGTGGAGGGTTGTTGATACCATATGCTCTGACCTAATTGGCTCCGAACTCTGTGGTGATGGATTTTACATGAACGGTTTTGCCTACTGGGAGACTTCATGTGGTCAAGTACTAGCCTTTGATCTGAAGTATGAGTTATACAGCCTTCTCCCACTTCCTCCTAATAGAAGACCAGAAGGTGTTCTAACAGTGTCTCGCGGGGAATTATGCTATGTTCTGCCTCATGAAGGAGGGGATGACGAGTGCTTGATAGAAGTATATGGGGGTATGGATATGAGTCTGAAGCGTTCATTTTCGTTCCGTGTTGGACATCTGGTAGtttgtgatgatgatgagaatgAGGAAGGTTTGAGTTTGCGTGCCTTGCCTTGTTTGGGTGATGACACATTCGCAGTTCTTGTGGGGAGGAATGTGTTGGCGTATGATGCCAGAGCAAACAGGGTTCGAGTGTTGAAAGTGTTAGGGAGGAAAGGAGATGGGAAATTTGTGCCTTATGTTAACAGCCTCGTGCCTGTGCGCCATCACCAGTTGTTCAGTGAGATTAGTTGTGTCACAATGCAACGTTGTCCTCGTCCATTGTGCCCTTAA 2517 0.4493 MRYRISYLMDEIWERAVETALDGETDHASARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANIGVSSLEQFPRLRNLQKLILSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQLKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEDEEDEEEEDDPGSGEIDGEDRPFGMTNGHSEGVDGVVDADEDEESDADEEETETSRRANGLSHQANEPESTGRLTSTEGEIDGHEQGEDVGDEDDNGETGEDEVGVEDDGEFEDDDEEEDYGAGYLVQPVAQSEAVTAGRGGLDGGNDNGEEEEEVDDDEGEDEEEVDDDEDDVQVVPPPSSNHKRKRDDDDDDDDGDEDEDDDGEKNDDDDDVVSYTKSGLLSSHFRLPAYARRLAFTLKTQRFLSLVNHAFLIAFSPFLPFNPRSLQKSGKARATKESWKSALAHFNPPVKEKLSIGDAVKDLVLPFLPAKSLCRFKSVSKKWNQWIKNPFFIHSQSYYCRTTCGFFYQPPYGIPIFISLNPRAYGVASPLFTFVAEILDVRSSCNGLICGKNGFGDPNYYICNPVNKQGLCLPKSNLYHGPQSAPVLAFEPSLFNFSANYELICAIPSLDDEPVIRFEIFSSRSWTWRVVDTICSDLIGSELCGDGFYMNGFAYWETSCGQVLAFDLKYELYSLLPLPPNRRPEGVLTVSRGELCYVLPHEGGDDECLIEVYGGMDMSLKRSFSFRVGHLVVCDDDENEEGLSLRALPCLGDDTFAVLVGRNVLAYDARANRVRVLKVLGRKGDGKFVPYVNSLVPVRHHQLFSEISCVTMQRCPRPLCP 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3809 838 SUPERFAMILY F-box domain 480 520 IPR036047 GO:0005515
Sto6g3809 838 MobiDBLite consensus disorder prediction 323 350 - -
Sto6g3809 838 MobiDBLite consensus disorder prediction 163 390 - -
Sto6g3809 838 MobiDBLite consensus disorder prediction 367 386 - -
Sto6g3809 838 MobiDBLite consensus disorder prediction 167 190 - -
Sto6g3809 838 MobiDBLite consensus disorder prediction 260 297 - -
Sto6g3809 838 MobiDBLite consensus disorder prediction 211 225 - -
Sto6g3809 838 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 465 815 - -
Sto6g3809 838 SUPERFAMILY L domain-like 48 164 - -
Sto6g3809 838 Gene3D Ribonuclease Inhibitor 13 178 IPR032675 -
Sto6g3809 838 SMART LRR_sd22_2 102 123 - -
Sto6g3809 838 SMART LRR_sd22_2 77 96 - -
Sto6g3809 838 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN-RELATED 465 815 - -
Sto6g3809 838 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Sto6g3809 838 MobiDBLite consensus disorder prediction 233 252 - -
Sto6g3809 838 Pfam Leucine-rich repeat 66 173 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3809 - - qsu:112003480 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3809 6 42705570 42713239 Sto6g3809 6 42705570 42713239 ECH