Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3804 ATGGAGAAGGGTGGTGGCGGAGAAGACCACACGACGAGCTTCAACAAATATGCTTCTGCTTGTGCCATAGTGGCTTCCATGATATCTATTATATTTGGCTACGACACGGGTGTAATGAGTGGAGCCATGATATTCATAAAGGAAGATCTGGGAATCAACGACACACAAGTAGAGGTTTTAGCAGGAATCTTAAACCTATGTGCATTACTAGGATCCTTAACCGCAGGAAGAACCTCTGATCACATAGGTCGCAGGTACACCATCATGGTCGCCTCCATCCTCTTCTTCCTGGGCTCAATTCTTATGGGCTACGGCCCAAACTACCCAATTCTAATGACCGGAAGGTGTACTGCTGGTTTTGGCGTGGGCTTTGCTCTTATGATAGCCCCTGTTTACTCTGCCGAAATTTCCTCTGCTTCCTCCCGTGGTTTTCTAACCTCCCTTCCAGAACTCTGTATTGGTCTCGGCATCCTCCTAGGCTATGTCTCCAACTACTTCTTAGGCAAACTAACTTTAAAACTTGGATGGAGATTGATGCTCGGTATCGCAGCAATTCCTTCACTTGCTTTGGCTTTTGGGATTCTCACAATGCCAGAGTCACCCAGGTGGCTTGTAATGCATGGCCGCCTAGGAGACGCCAAGAAAGTACTCTCACAAATTTCTAATACCGCTCAAGAAGCTGACCTCCGGTTCAAGGATATCAAAGTCGCCGCTGGGATTGACGACAATCAAGACGACGTCGTGAAGCTGCCCCACCGCGGTGAAGGAGTTTGGAAAGAGTTGGTTTTAAGACCCTCGCCTCCTGTGCGTTGGATGCTAACCGCAGCCGTTGGGATTCATTTCTTCGAACACGCGACGGGCATAGAAGCTGTGATGCTATATAGCCCAAGAATCTTCAAGAAGGCTGGCGTCACCAGTAAGGACAAGCTCTTGCTCTCAGTCATTGGAATAGGTGTTACCAAGGTTGTGTGTTTGGTCATAGCTTCGTTGTTGCTTGATAGACTTGGCAGAAGACGACTCTTGCTAACCAGCACCGCGGGAATGATTTGCGCACTGTCGGTATTGGGCTTTAGCTTGACCATGGCGGATCATTCCACGGAGAAGCTAGTATGGGCCTTGGGCCTTAGCATTGCGGCCACTTACACCACTGTGGGCTTCTTTAATATTGGGCTTGGGCCTGTCACGTGGGTGTACAGCTCAGAGATATTTCCTCTGAAGCTGAGAGCACAAGGAGCGAGTATTGGAGTTGCGGTGAACAGGGCAGTAAATGCTGTGGTGTCTATGACTTTTATCTCAATCAATAAAGCAATCACTATAGGTGGGACATTCTTCATGTTTGCTGCTGTATCTGCTATTGCTTgggccttcttcttcttcttcttgccgGAAACCAAAGGCAGGTCCTTGGAAGAAATGGAGACGCTTTtcaccaaaaataataataatcgtAGAAATGTAGCCGCACAGAATGCTTGA 1476 0.4661 MEKGGGGEDHTTSFNKYASACAIVASMISIIFGYDTGVMSGAMIFIKEDLGINDTQVEVLAGILNLCALLGSLTAGRTSDHIGRRYTIMVASILFFLGSILMGYGPNYPILMTGRCTAGFGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGLGILLGYVSNYFLGKLTLKLGWRLMLGIAAIPSLALAFGILTMPESPRWLVMHGRLGDAKKVLSQISNTAQEADLRFKDIKVAAGIDDNQDDVVKLPHRGEGVWKELVLRPSPPVRWMLTAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKDKLLLSVIGIGVTKVVCLVIASLLLDRLGRRRLLLTSTAGMICALSVLGFSLTMADHSTEKLVWALGLSIAATYTTVGFFNIGLGPVTWVYSSEIFPLKLRAQGASIGVAVNRAVNAVVSMTFISINKAITIGGTFFMFAAVSAIAWAFFFFFLPETKGRSLEEMETLFTKNNNNRRNVAAQNA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3804 491 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 7 487 IPR045262 GO:0015144
Sto6g3804 491 Gene3D MFS general substrate transporter like domains 10 480 IPR036259 -
Sto6g3804 491 PANTHER POLYOL TRANSPORTER 3-RELATED 7 487 - -
Sto6g3804 491 PRINTS Sugar transporter signature 29 39 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto6g3804 491 PRINTS Sugar transporter signature 112 131 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto6g3804 491 PRINTS Sugar transporter signature 283 293 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto6g3804 491 PRINTS Sugar transporter signature 377 398 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto6g3804 491 PRINTS Sugar transporter signature 400 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto6g3804 491 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 465 IPR020846 GO:0022857
Sto6g3804 491 Pfam Sugar (and other) transporter 21 476 IPR005828 GO:0016021|GO:0022857|GO:0055085
Sto6g3804 491 ProSitePatterns Sugar transport proteins signature 1. 75 92 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto6g3804 491 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 472 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto6g3804 491 ProSitePatterns Sugar transport proteins signature 1. 328 345 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto6g3804 491 SUPERFAMILY MFS general substrate transporter 13 473 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3804 Sto-Chr6 42684362 42686001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3804 9 484 Organic Solute Cotransporters AT4G36670 67.708 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3804 - - qsu:112005222 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3804 6 42684362 42686001 Sto11g1563 11 14759194 14766371 ECH
Sto6g3804 6 42684362 42686001 Sto6g3804 6 42684362 42686001 ECH