Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3782 ATGGCGTTCAAAAAAATCTTTGCCCAACGCTTTCCCAACATCACCAAAATCTCATCTCAAACGCTCACCAATTGTCGAATTTCCTCTTCCTCTGTTCATGTTCGGATACCTTCGAGTACCGCCGCTCCTGACATTGCTCCGGATCCGGGAGATAACGCCATCTTCCGCCGTTTCCTTCACAGGGGGGCTGGTTCTGTACCGCCCTTCTCTCCGAAGCTCGGGGAAAGCCTTGTTCACAAGTTGAAGGAGATGGACATTGTCAAAAACCGCCTTCGGTTCGATGGATTGCCTCCGCCGTTGGACAAGTCCGATTCCACCGAAGCTGTAAACGCCGAGGATGCGAGAAAATTGCTCAAGGTGGCGCAACTGGAATTAGTGAAATCGAGGCTGAGGGAGATCCGAAATACTTGCATACTATATTCAGAGTTTCATCGGATCTGTGAAGGAATTTGTTCGGATCCGGATCAAGCCACGCAGATTGCCAAGATGCTTGATGATTCTGCTACTGTAGTTAGATTGGGAGATGTCGTATTTCTCAGGCCTGAACAGGTAGCaaaagccatccaaaatctatTTCCCGTTGTTGGAGTGAATGAAGCACAGACCGCAATGAGAGAAGAATTAGAAGAAATGGAGAAAGAGAAGGCAGTGATCGACGGGAAAGCAGACAGGTTGGTTCGGCGGGAGCTGTGGGGTGGGCTGGGTTTCATGGTGTTGCAGACAGCAGCATTCATGAGGCTCACATTTTGGGAGCTTTCTTGGGATGTGATGGAGCCCATATGCTTTTTCGTCACCTCCACCTACTTCATGGCTGGCTTCACCTTCTTCCTCAGGACCTCCACTGAACCCACATTTGAAGGTTACTACAAAAGCCGTTTCATCGCCAAGCAGAAGCGCCTCATGAAGCGTCGCAATTTTGACATAGCTAGGTATAATGAGCTCAGGGCTGCCTGCCCTCCCGATTCATcatcctttccttctcttctcttccaaaAGTCTTACCCTCAATGA 1011 0.4748 MAFKKIFAQRFPNITKISSQTLTNCRISSSSVHVRIPSSTAAPDIAPDPGDNAIFRRFLHRGAGSVPPFSPKLGESLVHKLKEMDIVKNRLRFDGLPPPLDKSDSTEAVNAEDARKLLKVAQLELVKSRLREIRNTCILYSEFHRICEGICSDPDQATQIAKMLDDSATVVRLGDVVFLRPEQVAKAIQNLFPVVGVNEAQTAMREELEEMEKEKAVIDGKADRLVRRELWGGLGFMVLQTAAFMRLTFWELSWDVMEPICFFVTSTYFMAGFTFFLRTSTEPTFEGYYKSRFIAKQKRLMKRRNFDIARYNELRAACPPDSSSFPSLLFQKSYPQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3782 336 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 327 - -
Sto6g3782 336 Coils Coil 194 228 - -
Sto6g3782 336 Pfam Mitochondrial calcium uniporter 155 314 IPR006769 -
Sto6g3782 336 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 327 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3782 Sto-Chr6 42515677 42517837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3782 K20858 - qsu:112023039 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3782 6 42515677 42517837 Sto6g3782 6 42515677 42517837 ECH
Sto6g3782 6 42515677 42517837 Sto11g1577 11 14873419 14875282 ECH