Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3780 ATGTCCACCCCTAATTATAATTCTTTCTTCTCTATTTTTGTCCTCTTCTCCACCATCATCACCTGCACCTATGCCATCCCTCCTACTCAACGCTTCAAAGAAGCCCCAAAGTTCTACAACTCCCCAAACTGCCCCACCCACGATGCTGTCCACGTGGCTATGACTCTTGACGTCACCTACCTCCGTGGTTCCATGGCCGCCATTCTCTCCGTCCTTCAACACTCTTCCTGTCCCGAGAATGTCTTTTTCCATTTTGTGTCTGCTGCCTCCAACCCTTCTTCCGCTTCCATTCTCAACCTCACCATTTCCGCTTCCTTCCCCTACTTGAAATTCCGAATCTACCCCTTCCACGACACCACCGTCTCCGGCCTAATCTCCACCTCCATCCGCTCCGCACTCGACTGCCCTCTCAACTATGCCCGCAACTACCTCCCCAATCTCCTCCCTCCACGTGTCCGCAAAGTCGTCTACCTCGACTCCGACTTGATCCTCGTCGACGACATTGCCAAACTCGCCGCCACTCCGCTTGGCGCTCACGCCGTCCTTGCCGCTCCCGAATACTGTAACGCCAACTTCACCACCTACTTTACGCCCACGTTTTGGTCCAATCCCTCCTTGTCGCTGACGTTTGCGGGTCGGAGGCCTTGCTATTTCAACACGGGGGTGATGGTGATCGACCTGGAGCGGTGGCGGGCGGGGGATTATACGACCAAGATTGAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAGCTGGGGTCGTTGCCACCGTTTCTGCTAGTGTTTGCTGGGAACATAGCGCCGGTGGATCACAAGTGGAACCAACACGGGCTCGGCGGCGACAACTTCCGTGGGCTTTGCAGGGATTTGCATCCGGGCCCGGTGAGCCTGTTGCATTGGAGTGGGAAGGGTAAGCCCTGGGCTCGCCTAGACGCCAATCGGGCTTGCCCCTTGGATGCCTTATGGGCTCCCTACGATCTGTTGGAGACGCCGTTTGCGCTGGAGGCTTAA 1017 0.5624 MSTPNYNSFFSIFVLFSTIITCTYAIPPTQRFKEAPKFYNSPNCPTHDAVHVAMTLDVTYLRGSMAAILSVLQHSSCPENVFFHFVSAASNPSSASILNLTISASFPYLKFRIYPFHDTTVSGLISTSIRSALDCPLNYARNYLPNLLPPRVRKVVYLDSDLILVDDIAKLAATPLGAHAVLAAPEYCNANFTTYFTPTFWSNPSLSLTFAGRRPCYFNTGVMVIDLERWRAGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHKWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRACPLDALWAPYDLLETPFALEA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3780 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 51 319 IPR029044 -
Sto6g3780 338 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 338 - -
Sto6g3780 338 PANTHER HEXOSYLTRANSFERASE 10 338 - -
Sto6g3780 338 Pfam Glycosyl transferase family 8 51 311 IPR002495 GO:0016757
Sto6g3780 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 50 329 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3780 Sto-Chr6 42496852 42497868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3780 11 336 Glycosyltransferase AT3G50760 70.000 1.64e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3780 K20893 - gmx:100783054 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3780 6 42496852 42497868 Sto6g3780 6 42496852 42497868 ECH