Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3779 atggcGCCCTCTTACTGCGTTCGGGAGAGGAAGGCGTGTGTGGGTTGGGTGCACAAGTACTTCAAAGACTGCCTCTGTAATCTCAAAGACGACTTCTCCTTCTCTTTCGGCCTCATTAGTCTTGTATGCTGGGGTGTCGCAGAAATTCCTCAGATTATTACCAACTTTCGCACCAAGTCCAGCCATGGAGTTTCTCTTGCTTTTCTCCTCACTTGGGTCGCTGGAGATATATTCAATCTGGTGGGTTGTGTTCTGGAGCCAGCCACGGTGAGTCTGAGTCACATACTCCGTCTTCTGTACTCAACAAGCACTATTCTATTAGTACTGCAAAGCCTGTACTACGATTACATCTATAGATGGTGCAGGGGTCGTCAAAGAGTTAGTAACAAAGAGgatgaagaagaagaagaagagaggaagccATTGAAACAAAAACCAGGTCATGAATCAGGAATTCCAATACCAAATGGGACACCCAAAGCAGCCCCATCCCCTCGAAAAACATACAGATCAGCGAGATCATTGGCTGGGAGTGGTACTCCTCCTTTTCGCAGCTACATGAGAATTGCCAAGAGTGGCCCTTCGGCTATGGGATTGGACTCTGATTCCTCCTCTGACGATGAAGCCCCTAATTCTCACAACGTCTCTCCTTCCAAACCCAGGCCCATCCCACGTTCTTTCGCTGGAGGTTATGGAACATTTCTAGCAGCATCGGTTAACTTGCCTATGCACAGTAATGCTTTAAGACAAGGGTATATAGCATTTACGGGAAGGAAAGTGTTAGAGGAACACGAGGCTCATAGTGCTTTTGGTCAATGGTTGGGATGGCTTATGGCTGCTATATATATGGGAGGCCGCCTCCCTCAAATTTGGCTCAATATTAAAAGAGGGAGTGTGGAGGGCTTAAACCCTTTCATGTTCATCTTTGCATTGATTGCTAATGTTACCTATGTGGCAAgTATTCTTGTACGAACTACAGAATGGGATAAGATCAAAGCTAATATGGCATGGTTGTTGGATGCTGTAGTTTGCGTGGCACTGGACCTATTTATAATATTGCAGTACATCTACTACAGATACTGGCGACAGAGAGCAGGAAGCCATGAAAATTATGGAGACTATGAAGAAGCAAGTAAAGCTGGGTCCTGA 1149 0.4439 MAPSYCVRERKACVGWVHKYFKDCLCNLKDDFSFSFGLISLVCWGVAEIPQIITNFRTKSSHGVSLAFLLTWVAGDIFNLVGCVLEPATVSLSHILRLLYSTSTILLVLQSLYYDYIYRWCRGRQRVSNKEDEEEEEERKPLKQKPGHESGIPIPNGTPKAAPSPRKTYRSARSLAGSGTPPFRSYMRIAKSGPSAMGLDSDSSSDDEAPNSHNVSPSKPRPIPRSFAGGYGTFLAASVNLPMHSNALRQGYIAFTGRKVLEEHEAHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPFMFIFALIANVTYVASILVRTTEWDKIKANMAWLLDAVVCVALDLFIILQYIYYRYWRQRAGSHENYGDYEEASKAGS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3779 382 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 380 - -
Sto6g3779 382 Pfam PQ loop repeat 32 88 IPR006603 -
Sto6g3779 382 Pfam PQ loop repeat 271 328 IPR006603 -
Sto6g3779 382 MobiDBLite consensus disorder prediction 197 219 - -
Sto6g3779 382 Gene3D - 271 371 - -
Sto6g3779 382 Gene3D - 35 134 - -
Sto6g3779 382 SMART ctns 46 77 IPR006603 -
Sto6g3779 382 SMART ctns 284 315 IPR006603 -
Sto6g3779 382 MobiDBLite consensus disorder prediction 128 224 - -
Sto6g3779 382 MobiDBLite consensus disorder prediction 128 146 - -
Sto6g3779 382 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3779 Sto-Chr6 42487445 42490768 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3779 K23678 - mnt:21392512 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3779 6 42487445 42490768 Sto6g3779 6 42487445 42490768 ECH